NONHSAT145028
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT145028 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2102 nt |
Genomic location |
chr17-:3710042..3712148 |
Exon number |
1 |
Exons |
3710042..3712148 |
Genome context |
|
Sequence |
000001 AATAAATTCC ACACTCCTGA TCGCATGAGC CCAGTAATTC AAGGCTGTGG TGAGCTATGA TCAAGCCACT GCACTCCAGC 000080
000081 CTGGGCAGCA GAGCAAGACC TGTCTCAAAA AATACATACA TACATAAATT CCACCCTTTT TGATAGCATG TTATGAGGCT 000160 000161 CACCAAGGTC TATCCTCTGG CAGTATCCCT GGCCTGTTCT CCCCATCTCC CCTGCCCTCT GCTCACCAGT TCCCTAAATG 000240 000241 TATCTTGATC TCACTAGCCC TACAGACTGT GCACAGAGCT GTTTCTACCT CCAGTGACAT GCTTCCGCCC AGGCTTCTCC 000320 000321 CCCTCCCGCC TCAATCTTCC CCTCACCAAC TTAAGGTCTT AGGGGCCCTT CTAGGAGGCA GTCCCCAACT TCCAGAGCCA 000400 000401 GGGTATAGGC TACTTCTATG TGTCCCATGG TACTGCCACA GAAGAGTCTC AGCTCTCTCC AGGATTCAGT TCTAAGGTCA 000480 000481 GTGCCTAAGA TAAAAATGGA GTGTAATTAA AATTCCTCTT AGAAATCTAA GGAAGGTGCC CTATTGAAGA CCAACATCTT 000560 000561 GAGGTCCCAT GTAGTCATTT CTTGCCCATG TGGGAACACA TTACTGTTTG GTTGAGTACC AGGTGAAGTG ATTGGCCTGC 000640 000641 AGTTAGGGCT GTGTTGTGCA AAAATCACTT GTTTTGGGGT GTTAGAACCA CATTTAGGCG AGAAGATCAC TTTTGGGGAG 000720 000721 CTTGGGAACT GAGGCAGGCC GCAGGTGCAG CAGAGGCATG AGCTTGCCCG GGCCCGCCCT CTTGTCTATG CTCATGGAGT 000800 000801 GAAGGAGGGG CCAGCGGAAT GGCCCAAACA ACTGATTTGT TTTTCTTTTT TTAAATCTTT TTCAGACAAA TACCATTGTG 000880 000881 TTTAAGCGAA ATGTGTGTAT AATGCCAAAT CACTGTACCC CACAACCCTG CACACCTCTA CACTGGACTG TAATTTCTTG 000960 000961 TTCCTAGTTT GTCTTGCTAG ACTGTAAGCT CCGTGAGAGC AGGGACCGTG TCTGCTTGTT GAGTGGGCTT TCCCCTGTGC 001040 001041 CTGCCAGCAT GCCTGGCATC TAGCAGGTCT TCTGTAAAGA TGGGATGAGT TTGTAAACCC TCCAGCCTCA GGAGTGGCTC 001120 001121 CATCCTCTGA GGCTCTGGGG CCCTCTGGCA GGCTAGTCAT TTTTCTGCCA TGTACGTACA ATGCTTTATT TTCATGTTGT 001200 001201 ATTTTCCTTT CTAGCCAGTA AGCAAGCTCC TAATGAGCAA GTTTCTTTGT GGTGTTATCT CTGTATCCTT TCATCAGGCC 001280 001281 AGCCCAGAGT AAGTAGTGCT TCGAAAGTGT TTGGTAAATG AATGAATTAT GGTAACCCAG CCCAGTTCTG GCATCACTGT 001360 001361 CTGCAGGTTA GTCTAATTCC AGATGAAAGC CCCAGATTCG AAAAAGGGAA GATTATTCAG AAGTGCATAT GGTTGTATAA 001440 001441 GAAAAAAAAA TCTCATTAAA TAGACCTGAG TAAACTTCAA ATTTTGATGA TCTGGCCATG TCGGAGCTGA AGCTTACCAG 001520 001521 CTCTCTAAAG CATTTGCTAG GGAATCATGC AGATGGTCCA AAATATTTTT TAGAAAAGCA TTCATCTGTC CCGGGATAGA 001600 001601 AGTAGAGGAA GCTGGTAGGC AGGCGCTAGA CCCTAAAGAA GGACTGCTGA GCCAGTTCTT AAGCCTGTGG TCCTGTCGGT 001680 001681 GAGGAAAGTG AGAGCAGTCC AGAGCAGGTG AAAAGAGCAG AGCTCATTCC TCCAGTGGCT CTTTTGCCTA AAGCAGCATT 001760 001761 CCTCAAACTT CTCACTCGAA GCATTAAGTT ACGGTGAGAT GCTAACACAC GCTTTAGACT TAAGTCAAAA TTTACTGTGA 001840 001841 AGCCACAGCA AACCATGGCT TCACAGATGA ATTAGTTGCT ACACAAATAA GTTCGATACA TAAGTACAGT AATTGCTTTT 001920 001921 AAACCTTATA ATAAGCAGTA AATTAGAAGT TAAACCATGT TTTTCTTTTA CGAACTGAAA GAAGAGAATG CTTTTGATAC 002000 002001 TGAGAATCGC ACACTGTGTC CAGGAAGATT GTTCTTGCAT AACCAGACCC ACAATAAATA TCTACAACTT TTCTTACATG 002080 002081 TTTATAAAAT AAATCTTAGA AG |
Predicted Small Protein
Name | NONHSAT145028_smProtein_152:247 |
Length | 32 |
Molecular weight | 3311.9773 |
Aromaticity | 0.0322580645161 |
Instability index | 50.6096774194 |
Isoelectric point | 8.88665771484 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.00363893305069 |
Amino acid sequence | MRLTKVYPLAVSLACSPHLPCPLLTSSLNVS |
Secondary structure | LLLEEELHHHHLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |