NONHSAT145274
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145274 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
620 nt |
Genomic location |
chr17-:6553209..6554895 |
Exon number |
2 |
Exons |
6553209..6553753,6554821..6554895 |
Genome context |
|
Sequence |
000001 GGCTTTTGCT CTGTCAGGCT GGTGGCGTTT TGGTGTCTTC GTTTGTTATG GCCGCTGCTG TCGCTATGGA GACAGATGAT 000080
000081 GCTGGAAATC GACTTCGGTT TCAGTTGGAG TTGGAATTTG TGCAATGTTT AGCCAACCCA AATTACCTTA ATTGTAAGTT 000160 000161 GTTAAGCACC TCATTAAATT GAGTAGCTAT TAATGATTTC TGACAGAAGA GTTGCAGTTC AAAATAGTAT CTACTTTTAC 000240 000241 ACATTCTCAG TTGAATGACA TTACACTTAT GCTGGTATAT AGATATAATT GCGTACTGGG ACTTGTGTTT TGAATCCAAT 000320 000321 GTGTGTTGGT GGTGGGGGTG TTATGTAAAT AGATCCTTTA TATTAGGGGT AACAAATCAC AGTTTAAGGA TTGGTTTGAC 000400 000401 CTACAGATTT TTTTTTTTAA TGCTTTTCAG TTCTTGCCCA AAGAGGTTAC TTCAAAGACA AAGCTTTTGT TAATTATCTT 000480 000481 AAATACTTGC TTTACTGGAA AGACCCAGAA TATGCCAAGT ATCTAAAGTA AGTTTAATTT TTATAATCCT AAGCATGTGT 000560 000561 ATACTTTATT ATATAATAGA TTTCTTAGTT TCACATTGGC Aaaaatgtat ttggaatctc |
Predicted Small Protein
Name | NONHSAT145274_smProtein_254:472 |
Length | 73 |
Molecular weight | 8814.3375 |
Aromaticity | 0.222222222222 |
Instability index | 49.3819444444 |
Isoelectric point | 8.63775634766 |
Runs | 12 |
Runs residual | 0.0257502027575 |
Runs probability | 0.0705484896662 |
Amino acid sequence | MTLHLCWYIDIIAYWDLCFESNVCWWWGCYVNRSFILGVTNHSLRIGLTYRFFFLMLFSS CPKRLLQRQSFC |
Secondary structure | LLEEEEEHHHHHHHHHHHHLLLLEEEEEEEELLEEEEELLLLLLLLLHHHHHHHHHHHLL LLHHHHHHHLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLL LLLLLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTTTTTTTTooo oooooooooooo |