NONHSAT145286
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145286 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
818 nt |
Genomic location |
chr17+:6658766..6661951 |
Exon number |
3 |
Exons |
6658766..6658970,6659361..6659429,6661408..6661951 |
Genome context |
|
Sequence |
000001 AGATGTTGTT TAGAGTTCTT CTGTTAGCAC AGCTGTTTCT AGGGTCTGGA AAAACTCTAA GGACCCCCAG GAGGATACAC 000080
000081 ACCAGATTGG GTCTGGGCTC ACACCACCCT GCATCCCCAG AGCCTCCCTG GACGCTGTTT GCAAGGTCCT CACCGCCTGG 000160 000161 AAGTCCAGGA GCCATTTTTA GGGAACAGCA TTCAAGCTCA ACATGAAACG AAACTCAACC GAAAGCCTGC AGAGAGCAGA 000240 000241 ACATGGAAGG AGACTTCTCG GTGTGCAGGA ACTGTAAAAG ACATGTAGTC TCTGCCAACT TCACCCTCCA TGAGGCTTAC 000320 000321 TGCCTGCGGT TCCTGGTCCT GTGTCCGGAG TGTGAGGAGC CTGTCCCCAA GGAAACCATG GAGGAGCACT GCAAGCTTGA 000400 000401 GCACCAGCAG GTGAGGAGGC GGCAGGGAGG ATGGGGTCTG AGAGTCAAGG TGAGTGTTCA GTCCTCCCTG CAGGTGAGAT 000480 000481 GGGGTCTGAG AGTTGGGGGA CGAGGGTCTA GTCCTCCCTG CAGGTGAGAT GGGGTCTGGG AGTCAAGGCA AGTGTTCAGT 000560 000561 CCTCTCTGCA GGAGAGATGG GGTCTGAGAG TCAAGGCGAG TGTTCAGTCC TCTCTGCAGG TGAGATGGGG TCTGAGAGTC 000640 000641 AAGGCAAGTG TTCAGTCCTC TCTGCAGGTG AGATGGGGTC TGGGAGTCAA GGCGAGTGTT CAGTCCTCTC TGCAGGACAG 000720 000721 ATGGGGTCTG AGAGTCAAGG CGAGTGTTCA GTCCTCTCTG CAGGTGAGAT GGGGTCTGGG AGTCAAGGCG AGTGTTCAGT 000800 000801 CCTCCCTGCA GGTGAGAT |
Predicted Small Protein
Name | NONHSAT145286_smProtein_242:526 |
Length | 95 |
Molecular weight | 10796.3686 |
Aromaticity | 0.063829787234 |
Instability index | 79.0117021277 |
Isoelectric point | 9.00958251953 |
Runs | 15 |
Runs residual | 0.0307585568918 |
Runs probability | 0.0463522345875 |
Amino acid sequence | MEGDFSVCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVRRR QGGWGLRVKVSVQSSLQVRWGLRVGGRGSSPPCR |
Secondary structure | LLLLEEEELLLLEEEEEELLLLHHHHHHLEEEELLLLLLLLLLLLHHHHHHHHHHHHHHH LLLLEEEEEEEEELLEEEEEEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |