NONHSAT145322
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145322 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
626 nt |
Genomic location |
chr17+:6919484..6920839 |
Exon number |
3 |
Exons |
6919484..6919654,6919814..6920004,6920576..6920839 |
Genome context |
|
Sequence |
000001 ACTGCAGTGT TTCCAGGGAT ATGGTGACCC TGAACTAGTT GATCAGTAAA TCTCAATCCA CCTGTAAATC ACCAAGCTCT 000080
000081 ACCTGATGTC TCTCCCAGAA GAGAATTAGG AGATGGGCCT TTCCCACTAC TCAGTTCAGG GACTCCACTC TCCACACTCC 000160 000161 ATCCATCCTG AGGCCCAGAT AAAGGCCACT GTGAAACGCA AGGTATATGA AGATTCTGGC ATCCCCCTTC CAGCTGAGTC 000240 000241 ACCCAAGAAA GGGCCCAAGA AGGTGGCATC TGGTGTCTTG TCACCTCCTC CAGCTGCCCC TCCTCCCAGC AGCTCCAGTG 000320 000321 TCCCTGAGGC CGGGGGTCCC CCCATAAAGA AACAGAAGGC TGACAGCCTG ACCCTGGATT CTGGCCTTCT CATGACCTCT 000400 000401 GCTGATCCTC CTCTCCTCTC CTGCTGAGCC TTCCACCTCT GACCTCTCAC TGTTCATGCC GGACCTGTGG ATCTCCTGGG 000480 000481 ACTCCGAGCA AGGCCTGCAC GAGAGAGGGC TGAAAGGCTG CTGGGGCTGC CACCTCGCTA TTCCCGCATA AGCATCTGCC 000560 000561 CCCAACCCCT TTGACCTTCA TCTGATGGAC ATTTTTATAC AGAAAACAAT AAAGATTTCC CTCTCA |
Predicted Small Protein
Name | NONHSAT145322_smProtein_206:346 |
Length | 47 |
Molecular weight | 5113.1529 |
Aromaticity | 0.0434782608696 |
Instability index | 109.108695652 |
Isoelectric point | 12.0088500977 |
Runs | 6 |
Runs residual | 0.0309265010352 |
Runs probability | 0.0381558028617 |
Amino acid sequence | MKILASPFQLSHPRKGPRRWHLVSCHLLQLPLLPAAPVSLRPGVPP |
Secondary structure | LEEEELLLLLLLLLLLLLEEEEEHHHHLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |