NONHSAT145437
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145437 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1100 nt |
Genomic location |
chr17+:7560035..7561086 |
Exon number |
1 |
Exons |
7560035..7561086 |
Genome context |
|
Sequence |
000001 TGCAATCTCA GCTCACTGCA ACTTCCGCAT CCCAGGTTCA AGCGATTCTC CCGCCTCAGG TTCCCGAGTA GCTGGGACTA 000080
000081 CAGGCATGTG CCACCATGCC CGGCTAATTT CTTTCTTTCT TTTTTTTTTT TTTTGCATTT TTTAGTAGAG ATGGGGGTTT 000160 000161 CTCCTTGTTG GTCAGGCTGG TCTCGAACTC CCGACCTCAG GTGATCCACC TGCCTCGGCC TCCCAAAGTG TTGGGATTAC 000240 000241 AGGCGTGAGC CACCGCGCCC GGCCTTCAGT TTCTTCCTAG GCCGTTCTGT CACCCAAATA GCTGCTACCC AGAGGGGCGG 000320 000321 GGTTGACCTA GGCTGAATAT CCACTTTGTT TTTATGGATG GCTCCCTTCC CCCATTCGCC TTCCCAGAAT ATCCTTCAAG 000400 000401 TTCCACTTCC CAGGGAGCTC TGGGGGAGGG GCGGCCATTC TGGCTCCGTC CCCAGTGGCC ACCTTGGAAA CATCGGCTGG 000480 000481 CTTTGGGACT ATTCCACCTC CTTCCCCTGA GCCCAGATCT GCCCCCACCA TCCTTTCTCT GGCTTCTTTT AGCAAGTTAT 000560 000561 CAACTAATCA CTAACTCCTT CCTTTTCCTC TGCATGCCAG CCTGAAAATT CCAAATCTAG CCTCTGAATG TCTTGGCTCC 000640 000641 ATCTCTTCAG ACCCCTTTGC CTTTAAAAAA AAAACAAAAA CAAAAACAAA AAAACCCATA ATGCCCACAG AATGTCAAAT 000720 000721 GAGGGGCCTC CTGCCTCCTG CTCTGAATAT TCTGTAGCTG TAGAGGCATT TTAACCCTTT GTCCTCCAGC ATCCCTTCAC 000800 000801 GTCCTCATCC TCTCTAACCT CCTTTTTCTT TTTTTAATGC TGCAGCCTCC ACACTCCACC CACAGGTGGA CCCTTCCCTT 000880 000881 TTTCTCTAGC TGGATCTGTG TTTCTTCCCT TCGGGCCCCC ATGTTTTCCT GCACCCGCCC TACCATGGTC TCTCTCTGCA 000960 000961 GTTATTTAAT GCCTGTGTCA GATCTACTGT AAAAAGAGGA TTAAGTAAAA TAAAATGAGA GCAATTATAT ATATAAATAT 001040 001041 ATATCATACA CAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA |
Predicted Small Protein
Name | NONHSAT145437_smProtein_353:604 |
Length | 84 |
Molecular weight | 9365.8529 |
Aromaticity | 0.156626506024 |
Instability index | 75.2144578313 |
Isoelectric point | 6.69671630859 |
Runs | 10 |
Runs residual | 0.0195448460509 |
Runs probability | 0.0415385974209 |
Amino acid sequence | MDGSLPPFAFPEYPSSSTSQGALGEGRPFWLRPQWPPWKHRLALGLFHLLPLSPDLPPPS FLWLLLASYQLITNSFLFLCMPA |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLHHHHHHHLHHHHLLLLLLLLLHH HHHHHHHHHHHHHHHHHHEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHH HHHHHHHHHHHHHHHHLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTT TTTTTTTTTTTTTTTTooooooo |