NONHSAT145643
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145643 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1468 nt |
Genomic location |
chr17-:10638955..10648079 |
Exon number |
2 |
Exons |
10638955..10639990,10647648..10648079 |
Genome context |
|
Sequence |
000001 CAGGCACCGT ATATTTGTTC TGTGATTGTA GAACCTACAA TCTCCTTTCT GATAAAGGAA TCCTACTTGT TTCCATAGAG 000080
000081 TATGACGTCC TCAAAATAAA CTTACACAGA ACATAATTCG ATTTTTTAAA GTGCTATATA TAAAGCAGGT CTCCCCACAG 000160 000161 AGATCAAAGG CCCACTTCCT GCCCACAGTA CACGGGGCTG TATCTATTTG TCTGCGGAGA TAAGAAGTTC CAATATCTGA 000240 000241 GCAGAACTAA TTTCAAAGCC TGCTCAGCAG AATTCTGATA AATGTCTTTT AAACGGCTCT GTTGAAATGT GTAACAGCGC 000320 000321 TGTCTTTTTT TTTTTTTTTT TTTTTTTTTA AGACAGGGTC TTGCATTGCA GCCACTGGAA AGCTTTATGC CTTAGGGGTG 000400 000401 GAATCACTGG GTGGTAGCAT GCTCAGGGTC ATATATTCCT ACAACATTTC ATTGTATCCC CACTCACCTT GGATATTGTT 000480 000481 TATATCCAGG TATGTCAGGT GCTACTGGAG AGAAGAAAAA ATTAACAGGT TATAGTCCTT ACCTTCTGAA ATTTGTGGCA 000560 000561 TAGTCTAGGA GCATGAACAA CACACATACA CACAGAACAA TTATTGCGAG ATTAAAACTA AGAATTTCCA GCCAAGTGCG 000640 000641 GTGGCTCACG CCTGTAATCC CAGCACTTTG GGAGGCCGAG GTGGGCGGAT CACCTAAGGT TAGGAGTTCA AGACCAGCTT 000720 000721 GACCAACATG GAGAAACCCC ATCTCTATTA AAAATACAAA AAAATTAGCT GGGTGTGGTG GCGCATGCCT GTAATCCCAG 000800 000801 CTTCTCGGGA GGCTGAGGCA GGAGAATCGC TTGAACCCAG GAGGTGGAGG TTGCAGTGAG CCAAGATCCT GCCATTGCAT 000880 000881 TCCAGGCTGG ACAGCAAGAG CGAAACTCTG TCTCAAAAAA AAAAAAACAA AAAAACCCAC ACACCCAAAA AAAACTAAGA 000960 000961 ATTTCCATAA AGGGAAAAAA AAAGTGAAAG TATAAGGAGA AGAGCATCCA CAGTCCCACC TAAGGAGATC AGGCGACTCT 001040 001041 AATTGAGGCC AGGTAGGTGC TAGCACAGGC TGACACTCAG CGATTCTGGA CGGAGCAAAG GCAACACTGG GAAGTGCTTT 001120 001121 GCCATTCCCT TGAAGAGCTC ACCTACCTTC TGCAGTCTGT TCTCAGCCAT GCAGAATCAA AAACTTGTTT TTTTAAGTAC 001200 001201 TTTCTATCAA TTATTTTTAT TTATTGTGTA ATCTGCCATG TATGATTTTG AAAGTCCTTT TTTTTTTTCA ATGGGGTCTT 001280 001281 GCTCTGTCAC CCAGGCTGGA ATGCAGTGGT GCAAATCACA GCTCACTGCA TCCTCGAGCT CCTGGACTCA AGCAATCCTC 001360 001361 CCGCCTCAGC CTCCCAAGAA GCTATGACCA CAGGCACATG CCACCATACC CAGCTAATTT TTTAAAATTT TTTTGTAGAG 001440 001441 ATGGAGTCTT GCTCTGTTGC CCAGGATG |
Predicted Small Protein
Name | NONHSAT145643_smProtein_572:721 |
Length | 50 |
Molecular weight | 5532.3928 |
Aromaticity | 0.0408163265306 |
Instability index | 72.3367346939 |
Isoelectric point | 12.0056762695 |
Runs | 9 |
Runs residual | 0.0216216216216 |
Runs probability | 0.0497948929321 |
Amino acid sequence | MNNTHTHRTIIARLKLRISSQVRWLTPVIPALWEAEVGGSPKVRSSRPA |
Secondary structure | LLLLLLHHHHHHHHHEELLLLEEELLLLLHHHHEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |