NONHSAT145652
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT145652 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1466 nt |
Genomic location |
chr17-:10698230..10707416 |
Exon number |
2 |
Exons |
10698230..10699265,10706923..10707416 |
Genome context |
|
Sequence |
000001 CAGGCAGGAC CGCCACCCTC CCATGCAAAT CACCCCCGGG AGTGCAGCTG GGCTCCTCCC GCTCCTCCTG GGCAATGCTC 000080
000081 CTGGGGAGTC TGTGGGGAAG ATGCCATCCA GGGCGCTGTG CGCTCTTCCT CATCCTCGCC CTCCTGCTGG ACGCGGTCGG 000160 000161 CCTGGTCCTT TTGCTGCTGG GGATCTTGGC CCCCCTGAGT TCCTGGGACT TCTTCATCTA CACAGGTGCC CTGATCCTGG 000240 000241 CTCTCAGCCT ACTGCTCTGG ATCATCTGGT ATTCCCTCAA CATTGAGGTG TCTCCTGAAA AACTGGACCT GTAATTTGGC 000320 000321 CATGGGAAGA GGAGAAGAGA CGCAGGTGCT GTATGCAGAC ATGTCTGTGA ACCTGGGGCT CTTGGGCAGC AACACGTTGC 000400 000401 AGCTTCCACC TAGCAAGCCA CGCCGGGACC AGGTCCCATC TGATGGAGGA GAATCAATTC AAGGAGATGC CCTTCCTTTA 000480 000481 CAGAACACCC TTTAACAGCA TCCAGGAGGA ACGAGAGGCT GCAATACTGA GGCTTTCAAA GTACTCACGA GGATGTCCGA 000560 000561 GAATGGCTGT GATGCCAGGC TTCTGGCAGG TTCCAGACTC CATCACAAGC CCAGCATCCC TGCACCAGAT CTGACATCGC 000640 000641 TGCTGTTGTG CCAGCTGTTT ATGAAGGGCC TGAGTAGCTA GCAGGTTTTT ATCAGGAGCC CTGCTGGGGG CTTAGACACC 000720 000721 AAAAGAGAAG ACTCATCCTC TGTAGTTCTT CTTGTGAATG TCCTTTTAGA AAAACAATTA GAACCAACCA CAAGCACCAA 000800 000801 AGTCCTAATG GGATCTCCTG CGAGCACATA TCAAGCAGGA TTGTTGCTAT TTCTCCTCAC TGGCTCTTTG GACAGACTGT 000880 000881 GTGAGCTCCT GGAGGGTTCC ACTGTATCTA CCCTTTGACA CTGACCAGTT GGCACATGGT GACATATTCC AATGTGTTGA 000960 000961 TTGCAAATGT GAACGTACAG CCAGTGCTGT GTGCGGGAGG ACTCTCTCCT CCTCAGTGGG GCCACACCGT GCACTATTAA 001040 001041 TGGAGCCCCA CTCCTTTGCA CAGCCTGGCC ATGCAGTGGC TCATATTGAG GTTTTAGCCA ACTGAAATCT CCCGTGCATT 001120 001121 TTTCTGACAA GCCAGCTAGG CCTCTGCTAT GCTGTCCTTG TGTCTTTCAT TTGATGACCT TAAGGGTGGG ACTGTTTTAT 001200 001201 CTTAAGTTAC AGGTGGTCAA GTCCAGCCCA AGGACAGCAA CTCTGAGGGT CAAGCCTCAT AGGCTAACTG GATAGATGTT 001280 001281 CTCTGCTTTG CCACCCACTG GAGCCCGACC TGCCCCACTA ATTTATATTT CCCCTGGTCT CATTTTGTAC TTTTTATTTA 001360 001361 TAATTCACCC TTAAAGTGTA TGTGTCTCTT ATAAGCTGCC TCCGATCTTT CATGGTATGA GGTGGTTACC TAAATAAAGA 001440 001441 AGGAGATTTG GCCTTTGTTT TTATGT |
Predicted Small Protein
Name | NONHSAT145652_smProtein_74:313 |
Length | 80 |
Molecular weight | 8765.605 |
Aromaticity | 0.113924050633 |
Instability index | 41.9911392405 |
Isoelectric point | 4.82623291016 |
Runs | 9 |
Runs residual | 0.0263568579851 |
Runs probability | 0.0511884433454 |
Amino acid sequence | MLLGSLWGRCHPGRCALFLILALLLDAVGLVLLLLGILAPLSSWDFFIYTGALILALSLL LWIIWYSLNIEVSPEKLDL |
Secondary structure | LHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHH HHHHHHHHLLEELLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHH HHHHHLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTTT TTTTTiiiiiiiiiiiiii |