NONHSAT145695

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT145695

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2766 nt

Genomic location

chr17+:12394011..12481229

Exon number

4

Exons

12394011..12394119,12428602..12428763,12434483..12434790,12479043..12481229

Genome context

Sequence
000001 ATCTCTTTCC CATGATCAGA TATCAGAGGA ACACTGAATT CTACAATTTC TTTGGACCAT CAGCATTAGC ATCTGTTGGA 000080
000081 AGTGAAAACA ATTAGAATCT GCATTTAAAT AAAATAATAA TTGTATTGAG ATATTCACTT ACTATAGAGT TCACCCACTT 000160
000161 AAAGGGTAGA ATTCAGTGGT TGTTAGTATA TTCAATAGTG TATTCACAGA TATGTGGAGC AATCACCATA GTCCAACTTA 000240
000241 AAAAGAAATG TCAGGCTGTT TAGCTATAAC CAAATTCTCT CATTTTTGTC TTGTTTGAAT ACATAAATGT ATACTATATT 000320
000321 ATTAAAAATT AGTTTTCAAT TTGTAGAGAA TTCTAGAAAG GCAGTATTTT TTTTTATTGT GAGATAACTT AATTAACTTG 000400
000401 TAGCTTCCAT TGTTTAGGTT GACAAATCTA CTGTCTGTCT AAATGTTTCT TCTTTAAAGA TAATCTTCAA CTCCTTTTAA 000480
000481 GATTTTCTCC TTGTATATTT TTAATAGTTT GACTATGATG TGTCTGTAAA TGAATTTAAT TTTGATACTT AGAGGCAGTA 000560
000561 CAAACAGGGC TTCTTGAATT TCATTTCTCC TTGTATTTTT AATTGGTGTT CTTTGTGTAC TTTGAGGTAA TGTTGTTTAG 000640
000641 TTATGTGTAT GAGTTATATC TGCATAGTGA AGTGTGCCTT TTGAAATATG ACTCCCTTTT TTAAAGTAAC ATTTTGTGTC 000720
000721 TTGCATTTTG ATCCAGTATA AATATTTGCA CCCATCTTTC TTTGAGTGTT TATGAGTAAG GCTTTAACTA TCAATGTTAC 000800
000801 TTTTAACTTT CCTGAGTCAT TTTGATTAAG ATGTGTTTTC TTTAAAGAAA AATAATATTA ATATGTGCTT CTAATAGTTG 000880
000881 TTTCAAAGAT TAAATATAAT AATACAATTA AAACAAATAG TGTAGTATTT GACATATAGA AAATGCTCAA TGAATACCAA 000960
000961 CTAATAATTG CGTGAAAAGC ATGCATTCAA TTTTTTTTTT TTTTTTGAGA TGGAGTCTTG TTCTGTGACC CAAGCTGGAG 001040
001041 TACAGTGGAG CAATCTCAGC TCACTGCAAC CTCCACCTCC CGGGTTCAAG TGATTCTCCT GCCTCAGCCT CCCGAGTAGC 001120
001121 TGGGATTACA GGTGCCCACC ACCATGCCTG TCTAATTTTT TGTATTTTTA GTAGAGATGG GGTTTCACCA TGTTGGCCAG 001200
001201 GCTAGACTCG AACTCCTGAC CTCAGGTGAT CTGCCCACCT CGGCCTCCCA AAGTGCTGGG ATTACAGGCA TGGCATTGAA 001280
001281 TTTTTAAAGC AAAATTGAAA TTTAAGAATT ATAATTCAAG ACTATAGTCT TTATTGTTAC ATATTTTATT TTAGGCATTC 001360
001361 TTCTTGACAT CTGCTCTCAT CCTTTCTAGT TTTCATTTGC TTTTCCTGGT TCTTTCTTGT TAAGTCTACT TTACTTCCTC 001440
001441 AGGCCCTGTG CTAAATGTGA TGGATGCTGC AGTGAGCAAA CCTCAGGGCT TACATTGTAG AAGGAAAGGC AGACTCAAGT 001520
001521 CAAATCATCA CTCAAACAAT CATGTGAAAT TACAACCATG ATACATGCTT TGGGATACAT GAGAGTAGAC TTGCAACTGT 001600
001601 CACCTTAGAT TCATATAACA TTTACAAAGC ACTTTTCATA CATTATGTCC TGTGAGATAA ATTACAGCCA TAGAAGATGT 001680
001681 ATCCCTTGAC CCTACATGAT TAAAGGGTAG ATGGTTAATT CTTTCAAAAC ACACATTTCT TGTACCAAAT GTCATGTACC 001760
001761 ACTCACTCTC AGAATCTGTC ATTCTGAGAA TACAGAGAAA TTTTGCCCAC TAATGGGATT CAACATTTTC ATGGGAGAAA 001840
001841 GGCAATAGAA CATTCCATTT CTTAGGTAAA ACAACCAAGA ATGCGGGCTG CAACTCTACC ACTTTGGGGG TGGGGGGTGG 001920
001921 AACTACCGAG CGATTAGATG TTCAATAAAT ATGTATTACC TGTCTTCTAT TGACTAAGAA CTGTGCTAAG CTGTGTAGAT 002000
002001 ACAATGAAAA TAAGACATAG TTCCTGTCTC ATGGACCAAG CTACCTATAT GAGAAGTTCC ATAGTGAGGA CCATGGAACA 002080
002081 CAGAAGACTC AGAAATTGGA CAGTAGTTGG GGACAATTGT AGCCCTCTCC ATATATTGAA ATACAGAAAA GCTATATCTT 002160
002161 TTCCGCAGTC AGAACTGTGT AAAGATGGAA TGAGTTTTCT GATGAGAAAA TATGTTTTTC TCCCACCGGT GTGTGGACTT 002240
002241 TCAACTTCTT TATCTCCTAT TATGTCAATG CTAGATGTCC CATATGCGTG ACTTTTTAAA GTGTTTATTA TAGGAATTTT 002320
002321 CAAATATTCA GAGGGGTGCT AAAAATAATA TCATAATTAT CCATGTACCC AATCTCCAAC ATCATTAAGC GATAACATTT 002400
002401 ATCCAAATCT GCTTTAGATC TCTAATTAAG AAGCAAAATT TTAAAGATGA AGTTGAAACC TCATTTGTCA CCCTACTGAT 002480
002481 CCCATTCTTC TTCCTGCCTC AGAGTTTGTG TGGCCCTAAA GTTGATGTCA CTCTTTTTCA TCCATGTTCT TGTATATTTA 002560
002561 CTGCATCAAT ACATCTGAAT TTTTTTTTTC CAGAAACTTT AACCCCAAAC CACCTTCTTG CTCAAAACCC TTCAGTGGCT 002640
002641 CCCAACTGTC TACACCAATG ATCCGCAAAT CAAGTTATCT TCTGAATCTT CTCGGGAGTT TCAAAATTAT ATAGATTCTT 002720
002721 GGGTTGTCCT TGGGGACTTT GCAAATTTTC AGGGTTTCTC AACTTT
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Predicted Small Protein

Name NONHSAT145695_smProtein_2003:2290
Length 96
Molecular weight 10973.9572
Aromaticity 0.0842105263158
Instability index 75.7926315789
Isoelectric point 9.63641357422
Runs 16
Runs residual 0.0393700787402
Runs probability 0.0484013425191
Amino acid sequence MKIRHSSCLMDQATYMRSSIVRTMEHRRLRNWTVVGDNCSPLHILKYRKAISFPQSELCK
DGMSFLMRKYVFLPPVCGLSTSLSPIMSMLDVPYA
Secondary structure LLEELLLLHHHHHHHHHHHHHHHHHHHHHLLLEEELLLLLHHHHHHHLLLLLLLLHHHHH
LLHHHHHHHHEELLLLLLLLLLLLHHHHHLLLLLL
PRMN -
PiMo -