NONHSAT145773
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145773 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
946 nt |
Genomic location |
chr17+:14358425..14365272 |
Exon number |
2 |
Exons |
14358425..14358516,14364419..14365272 |
Genome context |
|
Sequence |
000001 GCTTGACCAC ACCTCCATAC CACCCCAGAG TGCTGGCTGG GGGTTTAGTC AGCAGGGGCT ACAGAAGCCA CGTTGGTGAC 000080
000081 TGGGTGAATG GGGGTGGTTG GAAAGGCTGA TGGGATCTTG AAGTGCCTGG CTGGACTTGG GAGTTGGAAG CAGCTATAAA 000160 000161 TGGGGACATT TGCTTGGCTC ACTGGCTAAT GAGTGAAGGA TCGCCAAGAG AAATAACATT TCAGCGGAAT TTCCTTAATG 000240 000241 ATTGGCACAG TTCATTAAGA GAAGAAACAA AACTGGAGAT ACCCTTGGGG AGAGGCTGGG GGATGGGAGG GTCAGATCAT 000320 000321 GGAGGTGGGA GTCCTGGCTC AAAGGAATGT GGCTTTCACA CAATTAGGTG TTTGAAGGAA GACAGAGCTT GGACACAGCT 000400 000401 GAATAATTTT GGCTAATTGA GATTTGCATG GGTCAAGGAC CAGAGGTCTT GCTGCTGTTA AAGCAGGACG ACATCCGTTA 000480 000481 TGGGATCCCT GGATGAACAG TGGCCCATGT GTGCCTCAGG ACAATGGAAA GTGGCGTCTC CCTGACAAAG AACAGCTTTC 000560 000561 ACGGGAGACA CCCTTCCACC TTTATCCCAG CTGGGGACTC TCCGTGGTGG ATCCGATGGC CTCAAACTTA CCCAAGTGGA 000640 000641 CTCACATCTA ATAAGTCTCC ACTGCTGTCC TTCTCTAGGA GTGAGAACTA ATGATGCCTC CATCCCCTGC TGTCGTGTGT 000720 000721 TCGTCAAGGG TACTATCTTT GTAAGATGGG CTTCTGAGAG TCAGAGAAGC TCCCATGAGG GCATTCACCA TTCCATGTTT 000800 000801 TGGTTGTAAG AACGGCTGAC CACTGCTTTA AATGTTTTAC TACAGAGAGT ATGGATTTTT GTCTACCAGT ACTGGTGTGC 000880 000881 AATTCATTCA TAGTCATTAG AGATgcattg ctataaagaa atatctgaga ctggAggccg gacgcg |
Predicted Small Protein
Name | NONHSAT145773_smProtein_188:415 |
Length | 76 |
Molecular weight | 8408.2102 |
Aromaticity | 0.0933333333333 |
Instability index | 52.0746666667 |
Isoelectric point | 6.26068115234 |
Runs | 14 |
Runs residual | 0.0377304964539 |
Runs probability | 0.0364082569966 |
Amino acid sequence | MSEGSPREITFQRNFLNDWHSSLREETKLEIPLGRGWGMGGSDHGGGSPGSKECGFHTIR CLKEDRAWTQLNNFG |
Secondary structure | LLLLLLEEEEEEHHHHLLHHHLHHHLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLEEEE ELLLLLHHHHHLLLL |
PRMN | - |
PiMo | - |