NONHSAT145919
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT145919 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1066 nt |
Genomic location |
chr17+:16342301..16345340 |
Exon number |
5 |
Exons |
16342301..16342374,16342641..16342728,16342842..16343017,16343499..16343567,16344682..16345340 |
Genome context |
|
Sequence |
000001 GGATTGGGAT ATTCCGACTC CTTAAGGGCC TGGCGCACAT AAGGTGTGAC CTTTTCATTC CCGTTGTTAT GGAGGGCCAC 000080
000081 ATCTGCCAGA GCCTGGAGTC TGCGAAGGCC GGGACCCGGT TCCCCGGCCC ACAGTGGGGG TGTGCAAACC CGAGAGAACT 000160 000161 GGGAAGTGCC GTCAGAAGCG ATAACTGACG ACGTCTAATG TCTATCTGAC CGCAGTCGCT GAAACCTCTA CAACTTAGTT 000240 000241 GACCGTAACT GCCAGAGCCC TGCCCTGAAT TCCTGTCCTT ACTCCCTCTT TAAGATTGCG TACCCACTGC AGAGTGCTGA 000320 000321 AGACGGGGTA GCCACGAGGT TGCAAATTCG TGAAGAATCA GCATCATGTT TGGCAGCTGA GTATTGGAGC CAGGAGCCTG 000400 000401 CCATGAGGTT ATATTCCCAG AGGATGTCAG TCCCAAGGAC CAGTAGCTGC CATCAGTTTG GATTCTGAAA ACTAACTGGC 000480 000481 ATCAACACTG GGTGTAGAAA CATGCTTGCC TTATGTATCA GAGGACATGC TCAGCAGATC CAAGAGATAT ATTTGGCAAC 000560 000561 TTTTTCTAGA AAAGGCACAT TGGGTATCAT TCATTACATT CTTGAGtttt tttgggtttt tttttttttt tttgagacag 000640 000641 tcttgctgta ttgcccaggc tggagtgtgg tggcacaatc acagctcatt gcatcctcaa tcacccaggc ctaagcaatc 000720 000721 ctcccacctt gtagctggga ctacagctca cagcacacct ggctaaaatt ttttttttgt tgagacggat tctctatgtt 000800 000801 gcccaggctg gtctcaggct cctgggctca gatggtcctc ctgcctcagc ttccaaagGC ACAGGCCAAG TTGTAGCTTT 000880 000881 GTCCCTTGCC ATCATGCCCA ACAAGAGGTT CTATACCTTT TAATGAATTG ACTTTCATAA ATTGGTTATG TTGGTGGGCA 000960 000961 AAGTTCTTTA AGCTGGAAAT TGTAAATTCC TCCTGAAATG TTTTTTCATG CAGTTACCAT GAACTAATAC TACAATAAAG 001040 001041 GATGGTCTTG GGTGTCAATT CTTGAA |
Predicted Small Protein
Name | NONHSAT145919_smProtein_68:187 |
Length | 40 |
Molecular weight | 4158.5731 |
Aromaticity | 0.0512820512821 |
Instability index | 48.9179487179 |
Isoelectric point | 6.51776123047 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0 |
Amino acid sequence | MEGHICQSLESAKAGTRFPGPQWGCANPRELGSAVRSDN |
Secondary structure | LLLEEELLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |