NONHSAT145943

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT145943

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1013 nt

Genomic location

chr17+:16342301..16345340

Exon number

5

Exons

16342301..16342374,16342641..16342728,16342895..16343017,16343499..16343567,16344682..16345340

Genome context

Sequence
000001 GGATTGGGAT ATTCCGACTC CTTAAGGGCC TGGCGCACAT AAGGTGTGAC CTTTTCATTC CCGTTGTTAT GGAGGGCCAC 000080
000081 ATCTGCCAGA GCCTGGAGTC TGCGAAGGCC GGGACCCGGT TCCCCGGCCC ACAGTGGGGG TGTGCAAACC CGAGAGAACT 000160
000161 GGTCGCTGAA ACCTCTACAA CTTAGTTGAC CGTAACTGCC AGAGCCCTGC CCTGAATTCC TGTCCTTACT CCCTCTTTAA 000240
000241 GATTGCGTAC CCACTGCAGA GTGCTGAAGA CGGGGTAGCC ACGAGGTTGC AAATTCGTGA AGAATCAGCA TCATGTTTGG 000320
000321 CAGCTGAGTA TTGGAGCCAG GAGCCTGCCA TGAGGTTATA TTCCCAGAGG ATGTCAGTCC CAAGGACCAG TAGCTGCCAT 000400
000401 CAGTTTGGAT TCTGAAAACT AACTGGCATC AACACTGGGT GTAGAAACAT GCTTGCCTTA TGTATCAGAG GACATGCTCA 000480
000481 GCAGATCCAA GAGATATATT TGGCAACTTT TTCTAGAAAA GGCACATTGG GTATCATTCA TTACATTCTT GAGTTTTTTT 000560
000561 GGGTTTTTTT TTTTTTTTTT GAGACAGTCT TGCTGTATTG CCCAGGCTGG AGTGTGGTGG CACAATCACA GCTCATTGCA 000640
000641 TCCTCAATCA CCCAGGCCTA AGCAATCCTC CCACCTTGTA GCTGGGACTA CAGCTCACAG CACACCTGGC TAAAATTTTT 000720
000721 TTTTTGTTGA GACGGATTCT CTATGTTGCC CAGGCTGGTC TCAGGCTCCT GGGCTCAGAT GGTCCTCCTG CCTCAGCTTC 000800
000801 CAAAGGCACA GGCCAAGTTG TAGCTTTGTC CCTTGCCATC ATGCCCAACA AGAGGTTCTA TACCTTTTAA TGAATTGACT 000880
000881 TTCATAAATT GGTTATGTTG GTGGGCAAAG TTCTTTAAGC TGGAAATTGT AAATTCCTCC TGAAATGTTT TTTCATGCAG 000960
000961 TTACCATGAA CTAATACTAC AATAAAGGAT GGTCTTGGGT GTCAATTCTT GAA
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Predicted Small Protein

Name NONHSAT145943_smProtein_473:712
Length 80
Molecular weight 9214.4964
Aromaticity 0.189873417722
Instability index 66.6151898734
Isoelectric point 10.4531860352
Runs 11
Runs residual 0.00104040228889
Runs probability 0.0156091920798
Amino acid sequence MLSRSKRYIWQLFLEKAHWVSFITFLSFFGFFFFFLRQSCCIAQAGVWWHNHSSLHPQSP
RPKQSSHLVAGTTAHSTPG
Secondary structure LLLHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHLEEELLLLLLLLLLL
LLLLLLEEEELLEELLLLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTooooooooooooooooo
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