NONHSAT145945
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145945 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
934 nt |
Genomic location |
chr17+:16342301..16345340 |
Exon number |
5 |
Exons |
16342301..16342374,16342641..16342728,16342974..16343017,16343499..16343567,16344682..16345340 |
Genome context |
|
Sequence |
000001 GGATTGGGAT ATTCCGACTC CTTAAGGGCC TGGCGCACAT AAGGTGTGAC CTTTTCATTC CCGTTGTTAT GGAGGGCCAC 000080
000081 ATCTGCCAGA GCCTGGAGTC TGCGAAGGCC GGGACCCGGT TCCCCGGCCC ACAGTGGGGG TGTGCAAACC CGAGAGAACT 000160 000161 GGATTGCGTA CCCACTGCAG AGTGCTGAAG ACGGGGTAGC CACGAGGTTG CAAATTCGTG AAGAATCAGC ATCATGTTTG 000240 000241 GCAGCTGAGT ATTGGAGCCA GGAGCCTGCC ATGAGGTTAT ATTCCCAGAG GATGTCAGTC CCAAGGACCA GTAGCTGCCA 000320 000321 TCAGTTTGGA TTCTGAAAAC TAACTGGCAT CAACACTGGG TGTAGAAACA TGCTTGCCTT ATGTATCAGA GGACATGCTC 000400 000401 AGCAGATCCA AGAGATATAT TTGGCAACTT TTTCTAGAAA AGGCACATTG GGTATCATTC ATTACATTCT TGAGtttttt 000480 000481 tgggtttttt tttttttttt tgagacagtc ttgctgtatt gcccaggctg gagtgtggtg gcacaatcac agctcattgc 000560 000561 atcctcaatc acccaggcct aagcaatcct cccaccttgt agctgggact acagctcaca gcacacctgg ctaaaatttt 000640 000641 ttttttgttg agacggattc tctatgttgc ccaggctggt ctcaggctcc tgggctcaga tggtcctcct gcctcagctt 000720 000721 ccaaagGCAC AGGCCAAGTT GTAGCTTTGT CCCTTGCCAT CATGCCCAAC AAGAGGTTCT ATACCTTTTA ATGAATTGAC 000800 000801 TTTCATAAAT TGGTTATGTT GGTGGGCAAA GTTCTTTAAG CTGGAAATTG TAAATTCCTC CTGAAATGTT TTTTCATGCA 000880 000881 GTTACCATGA ACTAATACTA CAATAAAGGA TGGTCTTGGG TGTCAATTCT TGAA |
Predicted Small Protein
Name | NONHSAT145945_smProtein_68:187 |
Length | 40 |
Molecular weight | 4190.6978 |
Aromaticity | 0.0512820512821 |
Instability index | 51.9230769231 |
Isoelectric point | 4.95758056641 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0 |
Amino acid sequence | MEGHICQSLESAKAGTRFPGPQWGCANPRELDCVPTAEC |
Secondary structure | LLLEELLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |