NONHSAT145949
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145949 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1123 nt |
Genomic location |
chr17+:16342301..16345340 |
Exon number |
6 |
Exons |
16342301..16342374,16342641..16342728,16342842..16343017,16343499..16343567,16344388..16344444,16344682..16345340 |
Genome context |
|
Sequence |
000001 GGATTGGGAT ATTCCGACTC CTTAAGGGCC TGGCGCACAT AAGGTGTGAC CTTTTCATTC CCGTTGTTAT GGAGGGCCAC 000080
000081 ATCTGCCAGA GCCTGGAGTC TGCGAAGGCC GGGACCCGGT TCCCCGGCCC ACAGTGGGGG TGTGCAAACC CGAGAGAACT 000160 000161 GGGAAGTGCC GTCAGAAGCG ATAACTGACG ACGTCTAATG TCTATCTGAC CGCAGTCGCT GAAACCTCTA CAACTTAGTT 000240 000241 GACCGTAACT GCCAGAGCCC TGCCCTGAAT TCCTGTCCTT ACTCCCTCTT TAAGATTGCG TACCCACTGC AGAGTGCTGA 000320 000321 AGACGGGGTA GCCACGAGGT TGCAAATTCG TGAAGAATCA GCATCATGTT TGGCAGCTGA GTATTGGAGC CAGGAGCCTG 000400 000401 CCATGAGGTT TTGAGAACAG AGTGCTGTTT TAGAGCTGGC AGCAGCATCT CAGCCCAAGA GAAGGTTATA TTCCCAGAGG 000480 000481 ATGTCAGTCC CAAGGACCAG TAGCTGCCAT CAGTTTGGAT TCTGAAAACT AACTGGCATC AACACTGGGT GTAGAAACAT 000560 000561 GCTTGCCTTA TGTATCAGAG GACATGCTCA GCAGATCCAA GAGATATATT TGGCAACTTT TTCTAGAAAA GGCACATTGG 000640 000641 GTATCATTCA TTACATTCTT GAGTTTTTTT GGGTTTTTTT TTTTTTTTTT GAGACAGTCT TGCTGTATTG CCCAGGCTGG 000720 000721 AGTGTGGTGG CACAATCACA GCTCATTGCA TCCTCAATCA CCCAGGCCTA AGCAATCCTC CCACCTTGTA GCTGGGACTA 000800 000801 CAGCTCACAG CACACCTGGC TAAAATTTTT TTTTTGTTGA GACGGATTCT CTATGTTGCC CAGGCTGGTC TCAGGCTCCT 000880 000881 GGGCTCAGAT GGTCCTCCTG CCTCAGCTTC CAAAGGCACA GGCCAAGTTG TAGCTTTGTC CCTTGCCATC ATGCCCAACA 000960 000961 AGAGGTTCTA TACCTTTTAA TGAATTGACT TTCATAAATT GGTTATGTTG GTGGGCAAAG TTCTTTAAGC TGGAAATTGT 001040 001041 AAATTCCTCC TGAAATGTTT TTTCATGCAG TTACCATGAA CTAATACTAC AATAAAGGAT GGTCTTGGGT GTCAATTCTT 001120 001121 GAA |
Predicted Small Protein
Name | NONHSAT145949_smProtein_68:187 |
Length | 40 |
Molecular weight | 4158.5731 |
Aromaticity | 0.0512820512821 |
Instability index | 48.9179487179 |
Isoelectric point | 6.51776123047 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0 |
Amino acid sequence | MEGHICQSLESAKAGTRFPGPQWGCANPRELGSAVRSDN |
Secondary structure | LLLEEELLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |