NONHSAT146035
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT146035 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1177 nt |
Genomic location |
chr17+:16925296..16926772 |
Exon number |
2 |
Exons |
16925296..16926077,16926378..16926772 |
Genome context |
|
Sequence |
000001 TGGACTTATG GAGACACAGA CACCTTTGTT TCAACACCTG GCCACAAGGC CCCCCAAAAG CTTCTATAAA CAAAAGGGCT 000080
000081 GACAGACCTA GCTCATCCGG TAGGCCCAGA TCTTCCTTGC CCGGGGTGCC ATGCAGGCAA CCCACCCCGG GCTAGGGCAG 000160 000161 TGGAGGCTTG ATGACCAGGT GAGCTTGGGA GTCCCTGGGC AGAGGCAGGT CTCAGTCCCA GGGCCTTGGG TCTGCTGCTG 000240 000241 GGTGTGATGA GTTAATAAGG AGGGCATGGT GTGCAGAATG AGCTCGGGTC CTGGCCATGG GACATCTGGC CAGCACTGTG 000320 000321 CCCCTTGGAG CCCATCTTTC CATGGGATCA TTAGAGTCCT TCTCTTGCAG CTGTTGGGAG AATGAAACAC AAGGAAAGCC 000400 000401 CAGGACCAGT ACCAGGCACA GGGTCAGTGG CGACAGGTGA GACCACTCCA TGTCCCCAGA CACATCTGTC CTCTGAGCCT 000480 000481 TTCACCTTGG GCTTGCCACT GGACTATCTC TCAAGTAGAA GGGGCTATGG GCGCCCCTCC CTGGTGGTCA GCAGTGGGGT 000560 000561 GACCACCTCC TAAGGCAGTG AGTTCCCCAT CAATGCGCGT GGCGGTTACT GAAGTGGGGC TGGGGCTGGA GCTGAGCCTG 000640 000641 CTGGCTGGGA GAGGGGAAGG CTGCAGTGGC TGGGGAGCCA GGTCCAACCC AGCAGCCTGG TGGCCCCTTC CCACTCTCAG 000720 000721 GGAATATCCc acaccttccc tgagcactgc ctctgggcca ggccctgctg ggaagggagc tggttctcac cacttggatt 000800 000801 taacacatgt gaacatttgC CATGCTTCAG ATCCTCCTTT TAAAACAAAA TTGTATGACA CAGCAATTGA TGAACGGATC 000880 000881 atcagtacaa tggactgtta ttcagtcgca gacaggaatg atgtgtggac ttgccatggt gtgcatgagc ctcgaagaca 000960 000961 tgatgctgag tgaaggaatc agacacaaaa tgctgcagat tgtctgatcc catgtattga aatgtccagc tcaggcaaat 001040 001041 ccgtggagac agaaagcagg cgagtgtcta ccaggggctg cggggagggg atggggagtg accacttagt gggtacaggg 001120 001121 cttccttttg gggtgaagaa aatcttttaa acttaggtca tggtgatgga tgcacaa |
Predicted Small Protein
Name | NONHSAT146035_smProtein_821:1006 |
Length | 62 |
Molecular weight | 6907.3918 |
Aromaticity | 0.016393442623 |
Instability index | 67.2032786885 |
Isoelectric point | 6.50433349609 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.0340607987667 |
Amino acid sequence | MLQILLLKQNCMTQQLMNGSSVQWTVIQSQTGMMCGLAMVCMSLEDMMLSEGIRHKMLQI V |
Secondary structure | LHHHHHHHHHHHHHHHHLLLLEEEEEELLLHHHHHHHHHHHHLHHHHHHHHLHHHHHHHL L |
PRMN | - |
PiMo | - |