NONHSAT146035

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT146035

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1177 nt

Genomic location

chr17+:16925296..16926772

Exon number

2

Exons

16925296..16926077,16926378..16926772

Genome context

Sequence
000001 TGGACTTATG GAGACACAGA CACCTTTGTT TCAACACCTG GCCACAAGGC CCCCCAAAAG CTTCTATAAA CAAAAGGGCT 000080
000081 GACAGACCTA GCTCATCCGG TAGGCCCAGA TCTTCCTTGC CCGGGGTGCC ATGCAGGCAA CCCACCCCGG GCTAGGGCAG 000160
000161 TGGAGGCTTG ATGACCAGGT GAGCTTGGGA GTCCCTGGGC AGAGGCAGGT CTCAGTCCCA GGGCCTTGGG TCTGCTGCTG 000240
000241 GGTGTGATGA GTTAATAAGG AGGGCATGGT GTGCAGAATG AGCTCGGGTC CTGGCCATGG GACATCTGGC CAGCACTGTG 000320
000321 CCCCTTGGAG CCCATCTTTC CATGGGATCA TTAGAGTCCT TCTCTTGCAG CTGTTGGGAG AATGAAACAC AAGGAAAGCC 000400
000401 CAGGACCAGT ACCAGGCACA GGGTCAGTGG CGACAGGTGA GACCACTCCA TGTCCCCAGA CACATCTGTC CTCTGAGCCT 000480
000481 TTCACCTTGG GCTTGCCACT GGACTATCTC TCAAGTAGAA GGGGCTATGG GCGCCCCTCC CTGGTGGTCA GCAGTGGGGT 000560
000561 GACCACCTCC TAAGGCAGTG AGTTCCCCAT CAATGCGCGT GGCGGTTACT GAAGTGGGGC TGGGGCTGGA GCTGAGCCTG 000640
000641 CTGGCTGGGA GAGGGGAAGG CTGCAGTGGC TGGGGAGCCA GGTCCAACCC AGCAGCCTGG TGGCCCCTTC CCACTCTCAG 000720
000721 GGAATATCCc acaccttccc tgagcactgc ctctgggcca ggccctgctg ggaagggagc tggttctcac cacttggatt 000800
000801 taacacatgt gaacatttgC CATGCTTCAG ATCCTCCTTT TAAAACAAAA TTGTATGACA CAGCAATTGA TGAACGGATC 000880
000881 atcagtacaa tggactgtta ttcagtcgca gacaggaatg atgtgtggac ttgccatggt gtgcatgagc ctcgaagaca 000960
000961 tgatgctgag tgaaggaatc agacacaaaa tgctgcagat tgtctgatcc catgtattga aatgtccagc tcaggcaaat 001040
001041 ccgtggagac agaaagcagg cgagtgtcta ccaggggctg cggggagggg atggggagtg accacttagt gggtacaggg 001120
001121 cttccttttg gggtgaagaa aatcttttaa acttaggtca tggtgatgga tgcacaa
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Predicted Small Protein

Name NONHSAT146035_smProtein_821:1006
Length 62
Molecular weight 6907.3918
Aromaticity 0.016393442623
Instability index 67.2032786885
Isoelectric point 6.50433349609
Runs 11
Runs residual 0.0275108347466
Runs probability 0.0340607987667
Amino acid sequence MLQILLLKQNCMTQQLMNGSSVQWTVIQSQTGMMCGLAMVCMSLEDMMLSEGIRHKMLQI
V
Secondary structure LHHHHHHHHHHHHHHHHLLLLEEEEEELLLHHHHHHHHHHHHLHHHHHHHHLHHHHHHHL
L
PRMN -
PiMo -