NONHSAT146109
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT146109 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
706 nt |
Genomic location |
chr17-:17714665..17715370 |
Exon number |
1 |
Exons |
17714665..17715370 |
Genome context |
|
Sequence |
000001 CTGATGGATG TGCTGACTAG TGAGAGTGCT TGGGCCCTCC CCCAGCACCT AGGGAAAGGC TTCCCCTCCC CCTCCGGCCA 000080
000081 CAAGGTACAC AACTTTTAAC TTAGCTCTTC CCGATGTTTG TTTGTTAGTG GGAGGAGTGG GGAGGGCTGG CTGTATGGCC 000160 000161 TCCAGCCTAC CTGTTCCCCC TGCTCCCAGG GCACATGGTT GGGCTGTGTC AACCCTTAGG GCCTCCATGG GGTCAGTTGT 000240 000241 CCCTTCTCAC CTCCCAGCTC TGTCCCCATC AGGTCCCTGG GTGGCACGGG AGGATGGACT GACTTCCAGG ACCTGTTGTG 000320 000321 TGACAGGAGC TACAGCTTGG GTCTCCCTGC AAGAAGTCTG GCACGTCTCA CCTCCCCCAT CCCGGCCCCT GGTCATCTCA 000400 000401 CAGCAAAGAA GCCTCCTCCC TCCCGACCTG CCGCCACACT GGAGAGGGGG CACAGGGGCG GGGGAGGTTT CCTGTTCTGT 000480 000481 GAAAGGCCGA CTCCCTGACT CCATTCATGC CCCCCCCCCC AGCCCCTCCC TTCATTCCCA TTCCCCAACC TAAAGCCTGG 000560 000561 CCCGGCTCCC AGCTGAATCT GGTCGGAATC CACGGGCTGC AGATTTTCCA AAACAATCGT TGTATCTTTA TTGACTTTTT 000640 000641 TTTTTTTTTT TTTCTGAATG CAATGACTGT TTTTTACTCT TAAGGAAAAT AAACATCTTT TAGAAA |
Predicted Small Protein
Name | NONHSAT146109_smProtein_506:682 |
Length | 59 |
Molecular weight | 6670.8193 |
Aromaticity | 0.206896551724 |
Instability index | 56.4743103448 |
Isoelectric point | 7.97698974609 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0296641178994 |
Amino acid sequence | MPPPPAPPFIPIPQPKAWPGSQLNLVGIHGLQIFQNNRCIFIDFFFFFFLNAMTVFYS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEEELLLEEEEHHHHHHHHHHHEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToo |