NONHSAT146163
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT146163 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
656 nt |
Genomic location |
chr17+:18171394..18172142 |
Exon number |
1 |
Exons |
18171394..18172142 |
Genome context |
|
Sequence |
000001 CTCCTTCGAC GACCAGACCC CAACACAAGC CTGATGTAGA AGCCACTTGC TTCAGGTAGC TCTAAATGTA CTGTCTCATA 000080
000081 CCATGGCTTA AAAAAAAAAA ATCCAGGATG AGTTAAAAGT GTTCGTGGTT TCATCACCTA GCCAAGGTTA ATGTCTGGGT 000160 000161 CTTCCGTTTC TAGCCAGAGA ACTGGAAACA AATCACTGTT TTGCTAGGAG CTTTGCATGA CCTCACGCCC TAGGCTGCCG 000240 000241 GGTCCTGGGC TGTCCTGATG GGCTGTGAAA TCCCACCCAC TCCCAGGGCT GCCGGGTCCT GGGCTGTCCT GATGGGCTGT 000320 000321 GAAATCCCAC CCACTCCCCT CCCCGCGAGG CAAGGACAGC CTCTGCCCTG CCTGCCTGGG AGCACGGTAT GGGCTTGCCT 000400 000401 AGGCCTCAGT GTCTTAACAC TGTGGTGACT GAAATTCCTT GTTTTACCTT CACCAAGTAA CCCAGAGCCA GGATCCTTGA 000480 000481 TGACTCTGGT AAGGCAGTGA CTACCCCTGC TCAGAATGCA AGGGTCGCTA GGGAAGATTT TAGAAAAAAA AAAAGGACTC 000560 000561 CAAAAATGGA GAATCTAAAT GTAGTCCTTT GAAAATGTCA CCCATAGATC CTCTACCACT AACTGTAATA AATTTGACCA 000640 000641 AATAGCAAAA AAAAAA |
Predicted Small Protein
Name | NONHSAT146163_smProtein_257:427 |
Length | 57 |
Molecular weight | 5841.9322 |
Aromaticity | 0.0535714285714 |
Instability index | 54.0785714286 |
Isoelectric point | 5.88836669922 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0277840866077 |
Amino acid sequence | MGCEIPPTPRAAGSWAVLMGCEIPPTPLPARQGQPLPCLPGSTVWACLGLSVLTLW |
Secondary structure | LLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLEEEEL |
PRMN | - |
PiMo | - |