NONHSAT146450
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT146450 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
708 nt |
Genomic location |
chr17+:19140401..19177701 |
Exon number |
4 |
Exons |
19140401..19140438,19174862..19175051,19176447..19176588,19177364..19177701 |
Genome context |
|
Sequence |
000001 TGGAGTGGCC TGAAGGGGAT TAGAGTGCGC GCGTTCGGAT CCTGGCTCAC TGCCCATCCC GCAGTGCTGC TTAGATGAGG 000080
000081 CTCAGCGGAC ATCAACCATC ACTACCACCA GTCCCTGCAA GTAACTCCCT CAGAAATCTG CATTGTTCAG AAATCTACCG 000160 000161 TGTTCCTCTG AAGCTACTAT GGAAAGAGTT AGATGTGACC TCCTGGAGGC ACAGGTGGGA AGGCAGAGTG GCTCTCAGAT 000240 000241 CCTGGGAGAA GCTGCCTAGG TGGCTTCTTG AGGGTGGACC TCCTACTCCC CTTCAGGAGC CTCTGCCTGG TCATCTCGTC 000320 000321 CTGCAAATAA AGTGGCCATT CTGTGGGTCT GCTCAGCCTT TTTTTTAGAG GAAGATGGAG ATGTTTCCTC ACTCGTGGAC 000400 000401 TGCACCTCAG GAAAGATAAA GCCAGTGAAT TGAGGATTGC GGAGTATTGC ACACATTCAG GTGTCCTGCA GTGGACACCA 000480 000481 TGACACTGAC TCCAGCATGC CTAGAAATCA CCATGGGGGC TTAAGAGAGT GGCACCCCCT CAGCTCTGCC CCCAGAATGA 000560 000561 ctggattttt gaacagactc ccaggaagtt ctgatgtatc tggttgatgg accacactGG TGGAACACTG TGGGAAAGGT 000640 000641 GGGGTGTACC CCTTTCCCAA GCATTCTCTG TCATCTGCTT TTAGAAAAAT AAAGTACATG TAGAAACA |
Predicted Small Protein
Name | NONHSAT146450_smProtein_74:367 |
Length | 98 |
Molecular weight | 11268.0336 |
Aromaticity | 0.103092783505 |
Instability index | 73.2391752577 |
Isoelectric point | 9.88519287109 |
Runs | 12 |
Runs residual | 0.00782741504391 |
Runs probability | 0.0396057822528 |
Amino acid sequence | MRLSGHQPSLPPVPASNSLRNLHCSEIYRVPLKLLWKELDVTSWRHRWEGRVALRSWEKL PRWLLEGGPPTPLQEPLPGHLVLQIKWPFCGSAQPFF |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLEEEELHHHHHHHLLLLLLLLLLLLEEHHHHHHHH LHHHHLLLLLLLLLLLLLLEEEEEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |