NONHSAT146519
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT146519 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
991 nt |
Genomic location |
chr17-:19617760..19619965 |
Exon number |
2 |
Exons |
19617760..19618530,19619746..19619965 |
Genome context |
|
Sequence |
000001 GTACCGACAC GGGCTGCCCA GGCAGGGGGT GGCTCGCTGG ACAAAGCTGG CCGTGCAGGC GCTCAGGCGT GCAGGGTAGC 000080
000081 CAGTGCCCCG GCCAGGAATG GACAGCCTCC AGGACACAGT GGCCCTGGAC CATGGGGGCT GCTGCCCTGC CCTCAGCAGG 000160 000161 CTGGTTCCCA GAGGCTTTGG GACTGAGATG TGGACTCTCT TTGCCCTTTC TGGACCCCTG TTCCTGTTCC AGGTGCTGAC 000240 000241 TTTTATGATC TACATCGTGA GCACTGTGTT CTGCGGGCAC CTGGGCAAGG TGGAGCTGGC ATCGGTGACC CTCGCGGTGG 000320 000321 CCGTGAGTAC CCAGCTTGGC CCAGAGCAGG GACGTTCTCT CCCCAGGCTT CTCCACCGGG TTCCCGGGTG GGCCCGTCTT 000400 000401 GGGTGGCTGG TCAGGGATGG GAAGACACAG CCCACGTGGC TGGACAGCTG CCTTCACAGG TGGAACCTGA GGGCCGGAGA 000480 000481 TGGAGGCGGT CTGGCCCTGG GGCACACAGC ACATGAGGCT GCTGAGCAGA GCCTCTGCCA CCGCTGCCTG CTGGGCAGCA 000560 000561 TTTCCTGACC CTGGCTCAGC CCAGATGCAG GGGCCTCTCT TCAGGCCTCA CCTGACAAGC TCTTGTTTCC TCCTGTGTGT 000640 000641 GGCGCCAGTT TGTCAATGTC TGCGGAGTTT CTGTAGGAGT TGGTTTGTCT TCGGCATGTG ACACCTTGAT GTCTCAGGTG 000720 000721 GGTGGCCTCC TGGAGCTGGG CAGGAAGCCA GGCAAGGGCA GAGCCAATTC CACAGGTGCC ATGGAGATGG CAGGTGGGAG 000800 000801 GGGCGCAGCC AGGTGATCTG GGAGCAATGG GCCCTGGGGT CAGCTGCCCC TGCCCTACCT CCAAGGACCA CAGGCTGTCA 000880 000881 GGGAAACAGA CCCTCCCCTT TGAAAGAGTC TGGGCCAGGA GAAAGGGGTG GAGATGGTGG AGACAGTTCT CTGATCTCTT 000960 000961 GCCCCCAGAG GAGGTCACCA AGTAGAGAAA G |
Predicted Small Protein
Name | NONHSAT146519_smProtein_479:700 |
Length | 74 |
Molecular weight | 8153.5419 |
Aromaticity | 0.13698630137 |
Instability index | 44.4698630137 |
Isoelectric point | 8.70562744141 |
Runs | 8 |
Runs residual | 0.0345558992488 |
Runs probability | 0.0295111287759 |
Amino acid sequence | MEAVWPWGTQHMRLLSRASATAACWAAFPDPGSAQMQGPLFRPHLTSSCFLLCVAPVCQC LRSFCRSWFVFGM |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLEEEEELLHHHH HHHHHHHHEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH HHHHLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTT TTTTiiiiiiiii |