NONHSAT146843
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT146843 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2405 nt |
Genomic location |
chr17+:20771746..20808543 |
Exon number |
4 |
Exons |
20771746..20771998,20790905..20791162,20795543..20795745,20805531..20808543 |
Genome context |
|
Sequence |
000001 TTTTTTTCTC ATCCAATCAA GACATGCAGT CCAGGAACCT CCGTGGGCAT TACCGCAGTA TATAAATGAT GCTGAAGCGG 000080
000081 AAACACGTTT TTTCAAGTTC CTGTATTTTT ATGTGGAGTT GCTCACTGCC CAACGTAGAG GACTAGGAAT CAGGAGTCGG 000160 000161 TGGCCGTATG CTGGAGGCTG GAGCCGCGGG AGCGCGGCTC GCCTCGCTGC GGTTGTTGGC AGTGACGGAG AGAGAGCAGC 000240 000241 GCGGCTGGAG CAGGACATTG TATTAGTTTC CTGCAATAAA ATATTTTTAC AATGTCAGTT TGTCGAAACT GCTGGACTGT 000320 000321 AAACTATTTC TAATCGAAAC CTGAAATTGT GTCACAACAT GGCTGTATTA CGATTCCATG TCAGAGGAAG GATATATACG 000400 000401 TGCATCTGGT AGTGGCTTCC AGTTGTTGCT GTCAGATGTT TGTTTGGGAA TGCATTCAGA AGAGCTTATC AAGGACTTGA 000480 000481 GTACAAAACA AGCATTTCCA CAAAAAAGCA GTGACACAAA TCACTATGTA ATATAGTTAG CCTTTGAACA ACACGGATTT 000560 000561 GAACTGCAGG GGTCTACTTA TGAGCAGATT TTCTCCCACC TCTACCACCT GAGACAGCGA AGACCAATCT TCCTCTTCCT 000640 000641 CCTTCTCCTT AGCCTGCTCA ACTTGAAGAC TATGATGAAG AGTTATATAA TGATCTACTT GCATTTAATG AACAGAAGTC 000720 000721 TAATGCCTAC ATTTAAAGGA TAGCCCGGCC CCCAGTAAAC GCGGATTCCT GCTCGTGGCC TTCTACGCCC ATTACTGGAG 000800 000801 CAGCAGCCAT CAGCGTAGAC GACGACGAAG TCTCCCATGT AGGAAAACGT GTCTCTGCTA ACTGGAGGCG CCGGCTTCAC 000880 000881 CCTCGGCTTC ATGTGCTTGC ATATGGCTCT GCGCTTTCAT CTCCATCTCC ATCCAGTGGC TCACGGAGTC GCTTGCTGGC 000960 000961 TTTCGTCTCT GATTCTTGTC CATGTTGATT TTCCTGCCCT TCTGAAACTT CCGGGCTTGC AGATTTCCTG ACAAAGTCCC 001040 001041 AGGTCTCATC CTCTGTGGCA AACTTCTTAA ATCTGGCAGC AGGAAACCGG TCCACCTGTG CTTTGCACTC ATTCCCGGTC 001120 001121 AGAAAGACCC CGGTCTTGCC GCCCCTCCTC ACGGCATAGA ACATCCCGAA CCCGTGAGAG CAGCGGCAGG GCAAGGCGGC 001200 001201 CAAGGCGACT CTGCGGCCAG GAACAGAAGC CGGCTCATCG CTCACTCCCG GCACCAGGAA GCATTTCGAC TCCCAAGGAA 001280 001281 CCACTAATTT TACAAAGAGA GTTGTCCTAA ACTGTGACAA ATTTTCCAGT ACTTAATTCT TTTTACAATT CATTCGTTTT 001360 001361 TTAAATGACA AAATTGTATA TATGTTGTGT AAAACCTTTT TAGAAATAGG TAGATGGTGG AATGATTGCA TTGCGCTCAG 001440 001441 GAACATATGC ATACTTACTT TTTGTGGTGA GAACCCTTCT TGATTTTCAA GAATACGATA CATTAACTGC AGTTACCATG 001520 001521 TTGTGCAATG TATCTCTTAA ACTTATTCCT CCTGTCTAAC TACACTTTTG AATGATTTCA CCGTCTCCCC AAACCCCTGC 001600 001601 CTCCCACCCC CGGTAACCTC CATTCTACTC TCTGCTTCTG TGAGTAGAAG CAGGAGGCTG GAGAATTGCT TGAACTCAGG 001680 001681 AGGCAGAGGT TGCAGTGAGC TGAGATCGAG CCGCTGCACT CCAGCCTGTG TGACAGAGCA AGACTCTCAA AAAAACAAAC 001760 001761 AAACAAACAA AAAAAACAGA GAATCCAGAG GTCAGACATT CCTTTTAGTA AGGACTCCAA TATGGTTTCT CACCTACTCA 001840 001841 CTCCAACAAA ATTGCTCTTC TCAAAGCACA AACGATATTG TTAAATTATG AATTAAAGCA TAATTCCTCA GCCTTTGTCT 001920 001921 TAATTTATGT ATCAGCAGCA TTTGACACAG GTGATCTCTC CTTTTTGCAA AACTTTCTTT GATAGAATTC CAGAACACTT 002000 002001 AACCCACTTT CCCCCCGACA TTTTTGATAA TTACCCCTAG TCCTTTTTTG CTGTTTTTTT CTCACCTTTA CTACTTTTTA 002080 002081 AATGTTAGAG AAGCACTAGG CTCAGGACCT GGACTTATCT TTCTTTTATT TACTTTCTTA CTAATTTTTG TGTCATTAAT 002160 002161 TTCCTGATAT TTCATATTAT ACCTCAACAC TAGACTACAC CCAGCACCGT CTGACTTCTT CACTTGGGTG TCAGCCAAGA 002240 002241 ATTTCAAAAT GAAGTTCCAC ATGGAGCCTC CAATACTCCC CAGACTTGCC CTTCCCCTAT CTGTTTAATG GCAACTCCCA 002320 002321 TTTTATAGTT TCTCAGCTCA ATATTCTTGA TATCCCCTTT TAGTTCTCTC TGTATCTGTC TGGTTCTCAT TCTCTATCTC 002400 002401 TCCAT |
Predicted Small Protein
Name | NONHSAT146843_smProtein_377:535 |
Length | 53 |
Molecular weight | 5762.4166 |
Aromaticity | 0.0769230769231 |
Instability index | 67.9846153846 |
Isoelectric point | 5.00628662109 |
Runs | 10 |
Runs residual | 0.041938287701 |
Runs probability | 0.0488429606077 |
Amino acid sequence | MSEEGYIRASGSGFQLLLSDVCLGMHSEELIKDLSTKQAFPQKSSDTNHYVI |
Secondary structure | LLLLEEEEELLLLEEEEEHHHHLLLLHHHHHHHLLLLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |