NONHSAT146912
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT146912 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
789 nt |
Genomic location |
chr17-:48265253..48266145 |
Exon number |
2 |
Exons |
48265253..48265998,48266103..48266145 |
Genome context |
|
Sequence |
000001 TGCCGAAGGT TCCCCTGGAC GAGACGGTTC TCCTGGCGCC AAGGGTGACC GTGGTGAGAC CGGCCCCGCT GGACCCcctg 000080
000081 gtgctcctgg tgctcctggt gcccctggCC CCGTTGGCCC TGCTGGCAAG AGTGGTGATC GTGGTGAGAC TGTAAGTAGC 000160 000161 TGGGCTCCAG TTCCCTGTAC CTGGTCAGGC CAGGGACTCT TCAGGCCTCC TTAGAGGCCT GGGGATGGGT GTCGGACTTC 000240 000241 ACCCAGGCAG GGGGAGGAAA GGAGATCCTG CAAGATGTCA GGGCCTTAAT CCAAAAAACT GAGTTAAAGC TCAGCCCCAA 000320 000321 GTCCCCTCTC CCAGACAGGA CCGCCTCTCC CATGAGTTGG CCCCAGCTCC CGTGAAGATT GCAGTGGGGA GGTTTCCCTG 000400 000401 GGAGTTGGGA GAGATGGCCA CAGTGGGAAG CAGCTGAGGA GAGAGAGATC CAGCAGAGGG GAGGCCTCAT CCTGCAGCCC 000480 000481 CAGCCTCAGC CTTCCCTGGC CAAGAGCTCA TGCTTTCCTT GCTCTCCCCA GGGTCCTGCT GGTCCCACCG GTCCTGTCGG 000560 000561 CCCTGTTGGC GCCCGTGGCC CCGCCGTAAG TACCCTGCTG TGTCCCCCAT GCCTTTAGAA CTCTACAGAT GCAGACAGTG 000640 000641 CCCCACTCGA TGCCAATGGA ACTTCCGCCT GACAGTTTGT CCCTTTCTCT CTTCTAGGGA CCCCAAGGCC CCCGTGGTGA 000720 000721 CAAGGGTGAG ACAGGCGAAC AGGGCGACAG AGGCATAAAG GGTCACCGTG GCTTCTCTGG CCTCCAGGG |
Predicted Small Protein
Name | NONHSAT146912_smProtein_509:757 |
Length | 83 |
Molecular weight | 9647.2476 |
Aromaticity | 0.0975609756098 |
Instability index | 75.6890243902 |
Isoelectric point | 10.7615356445 |
Runs | 10 |
Runs residual | 0.0139504804139 |
Runs probability | 0.0499558381911 |
Amino acid sequence | MLSLLSPGSCWSHRSCRPCWRPWPRRKYPAVSPMPLELYRCRQCPTRCQWNFRLTVCPFL SSRDPKAPVVTRVRQANRATEA |
Secondary structure | LLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLEEEEEEELLLL LLLLLLLLEEEEHHHHHHLLLL |
PRMN | - |
PiMo | - |