NONHSAT147297
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT147297 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
850 nt |
Genomic location |
chr4+:120415641..120421434 |
Exon number |
3 |
Exons |
120415641..120415678,120418966..120419058,120420716..120421434 |
Genome context |
|
Sequence |
000001 CACCTTGACC ATCTCATGAC TTTATACAGG AATCGGAGAC ATCCAAGGCC ATTCCATTTC TAAATCACAC TTATCCCTCA 000080
000081 ATCAAGTCAG TGACTGGATC ATCTCCTAAG GTTTCACCTG CTTTGCATCA Gggcagggtt ccactcccat tgcccaggct 000160 000161 ggagtgcagt ggcgtgatct tggctcactg caaccccctc ctcccctatt caagcaattc ttctgcctca gtcttctaag 000240 000241 tggctgggac tacaagcgcg tgccaccaca cccgcgctta taatagaaaa taatttttct gtttttttgt agggatgggg 000320 000321 tttcaccatg ttggccaggc tggcctcgaa ctcctgagct caagtgatca acctgcctct gcctcccaaa gtgctgggat 000400 000401 tacaggtgta agccaccatg cccggcctct gatttttcta tagtgagaac ataactattt ctgtaataat attaaaaaTA 000480 000481 CTTGTCAGTA TCACATAGAA TTTTCAACAG CAGATTCAAA TAAAATGAAT CCTTGTGTGT GTGTATATAT ATATATATAA 000560 000561 ATGTAGAAGG ATAACATCTA TAATAGGTGA TTACTATGTT GACTGTATTT ACAGGGATGG AGAAAACTCA AAAGAGCCAT 000640 000641 TAGTATTTTT AATGGAGAAA CTCTTAATCC AATCAATAAG GAAAGCAACT GTTATGGAAA GAATGAGATG TCCAAGTGTT 000720 000721 TGAAACAATG CTCTGAACAC ACTTCATACT TCTGAGGAAG AGCTTTGAAC AAAGGAGTAA ACAAGTAGAA TGCTGAGAAA 000800 000801 AATAGGGAGA CGACAGTGGC ACATGACACC TAGTTTTTTT TTTTTTTTTT |
Predicted Small Protein
Name | NONHSAT147297_smProtein_314:442 |
Length | 43 |
Molecular weight | 4312.7774 |
Aromaticity | 0.047619047619 |
Instability index | 41.6738095238 |
Isoelectric point | 6.36395263672 |
Runs | 9 |
Runs residual | 0.038125376733 |
Runs probability | 0.0277728709101 |
Amino acid sequence | MGFHHVGQAGLELLSSSDQPASASQSAGITGVSHHARPLIFL |
Secondary structure | LLLEELLHHHHHHLLLLLLLLLHHHLLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |