NONHSAT147308
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT147308 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1049 nt |
Genomic location |
chr4+:159193282..159198934 |
Exon number |
2 |
Exons |
159193282..159193325,159197930..159198934 |
Genome context |
|
Sequence |
000001 AACACAATCA AGGGACAAAC TACATCGTGT GAGGCCAGCT CAGGCTGCTA CTACTCTGTC ATCCTAAGAG AAGAATCTCT 000080
000081 GAAATTTTGA CAGCATGTGG AAATATTCCC ACTGATTATT GGATTATGAA GATGGAGAAG AGTATTTTAA AGGAGTTTTG 000160 000161 TAGGAGCTGC AGGAGAGGAT TCAGGTATAT TTATATTCAT AGTATATGTG TAATGCTTTG TTCCTGCTCC TTCATTACTT 000240 000241 CTATTAAGAA GAGACAAGGA GAGAGACATG GAAATGACTA AGGCACCAAA GGAAAGGCAT TTTTTACATT TCAAAGTCAC 000320 000321 AGGTAAAAAA CATTTATCAT TTTCATGTGG AAACATTCTT CCAAGCTGTA ACTAATAATG GTCTCTCCTA CTATTTCCTC 000400 000401 CCACTTCTGC AGCTGCTAAA ACACCTTTGC CACCAGCTCC GACAATCAAA CCATGCCTTT GGATTTCTTC AGTTTCTAAA 000480 000481 GGGGAACATC TTTTTAAAGC CTTTGTTGTA TTAATTAAGA ATCCAGggcc aagcccgtgg ctcatgccca taatcccagc 000560 000561 actttgtgag gccaaggcag gtagatcacc tgaggtcggg agttcgagac cagcctgacc aacatggaga aaccccgtat 000640 000641 ctattaaaaa tacaaaatta gccaggcata gtggcatatg cctgtaatcg cagctattca ggaggccgag gcaggagaat 000720 000721 cgcttgaata tgggaggtgg aggctgtggt gagccgggat cgtgccattg cactccagcc tgggtgacaa gagcgaaact 000800 000801 ctgtcaccaa aaaaaaaaaa aaaTTCAGTG GCTGGCATAG AGTCAAGAAA CTCTATGAAC AGAAGATAAC TGACTTAGCA 000880 000881 GCAGCAGAGT AAGCCTCCAA AAAGAAGCAA GATCTTTGAA AGTGGCTGGG AGAGCTCCCA ACTGAATAGG CTTCAGCCTC 000960 000961 CCACTGTCAG TACTTAAGGT TCAAATGCCT CAGGCTGCGG GAGGGGACGG GGTGGAGACT GGCCATGTCG GAGGTGACCT 001040 001041 GGAGTCTGC |
Predicted Small Protein
Name | NONHSAT147308_smProtein_125:280 |
Length | 52 |
Molecular weight | 6091.2145 |
Aromaticity | 0.0980392156863 |
Instability index | 55.8411764706 |
Isoelectric point | 9.59808349609 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.034357887299 |
Amino acid sequence | MKMEKSILKEFCRSCRRGFRYIYIHSICVMLCSCSFITSIKKRQGERHGND |
Secondary structure | LLLHHHHHHHHHHHHHLLLEEEEEEEEEEEEEELHHHHEEHHHHLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooo |