NONHSAT147845
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT147845 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
462 nt |
Genomic location |
chr16+:2808909..2809549 |
Exon number |
2 |
Exons |
2808909..2809173,2809353..2809549 |
Genome context |
|
Sequence |
000001 TTTAGGAGAG AGATTGTAAG TGGGAGGGCC AGGAAAGAAG CCAAGCAGGA TGAGCTTGCT TTTGAATCCA TCTTTAGCAG 000080
000081 GTCAGAGAGC AGCTCTCCTC GACGGGAGAG AAAGAAAAGC TCAAAGAAGA AGAAGCACAG GTATGAGGTG GGAATACTTG 000160 000161 AATGACTGGA GAAGGTTTGC TGAATTCAGG CAGAGGTGTT TCTTATGTTT TTTCTTCTCT TTTTTCCAAC AGGTCAGAAT 000240 000241 CTGAGTCCAA GAAACGTAAG CATAGGTCTC CCACTCCAAA GAGCAAACGT AAATCTAAGG ACAAAAAGCG AAAGCGGTGA 000320 000321 GTGAATTTGT GGGGAATTTG CTTAGGAAGT AAGTGAACGC CACCTTAGTG GGAGGGAGTT GAATGAGTTA TGTCCCTGAC 000400 000401 TGGTAAAGGG TTGAGGGATA CGTGAGGAGA ATCCAGGGCA GGTACAGCAG TACCCTGAGC TG |
Predicted Small Protein
Name | NONHSAT147845_smProtein_161:319 |
Length | 53 |
Molecular weight | 5969.7574 |
Aromaticity | 0.0576923076923 |
Instability index | 71.8519230769 |
Isoelectric point | 11.4044799805 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.0470077921058 |
Amino acid sequence | MTGEGLLNSGRGVSYVFSSLFSNRSESESKKRKHRSPTPKSKRKSKDKKRKR |
Secondary structure | LLLLEEELLLLLEEEEEEELLLLLLLLHHHLLLLLLLLLLLLLLLHHHLLLL |
PRMN | - |
PiMo | - |