NONHSAT147915
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT147915 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
1365 nt |
Genomic location |
chr16-:3072664..3074262 |
Exon number |
2 |
Exons |
3072664..3072999,3073234..3074262 |
Genome context |
|
Sequence |
000001 GAGCGGTTCC TCTCCGTGGC GCCCTACCGC CTTCGGCGCG AAGGTGGCTG GTGCGTACCG TCCCGAACCC TAGGAGCCGA 000080
000081 GGTGAGCGCC GCGAAGACCC CCGACATTAA GAAGTGGTGT CCACCGCAGC CCCCTTAAGC CGGATACCCT CCCCCACCCC 000160 000161 GAGGAGCAAG CCTGCCTTCC GCCACGCGCC GCCCGTCTTC CGCGCCCGCG CAGAACCTCG CGGCTGTGCC CGCCTAAAGC 000240 000241 CACGCCCATC CTCTCTTGGC CACGCCCTCA GAGACTCCTC CCCTGTCGCC CAGATCCCAC CCGCAGGACC CCAAAACCCA 000320 000321 ATGATCCTGC AGCAGCCCTT GCAGCGAGGC CCCCAGGGAG GGGCCCAGCG CCTCCCGCGG GCCGCCTTGG GGGTGACTTG 000400 000401 GGGCCTGGAC GCCAGGTGCG TGTAGGGGAC CAGGGTGGGC CTGACCAAGG GCCGCAGGAG CTTTGGCTGG GTGCTCAGGA 000480 000481 CTGGTCTGCA GGATGAATAC GGGGTGGGGC GAATCGGCGG GGCTTAGGCG TGAGCTGAGA TGGGACTGGG GCTGCGGCTG 000560 000561 AGGGTCGAGA CTTCCGAGGT ACCCTGCTGG ATGGTCCAGG AGAGCGGGGA CCGGCACCAG CTGAGACAGG AATGGGCTTG 000640 000641 GGGCTCCTGG CTGATGCTGC AGGCTTAGGC GGGCAGATCC TTGGGAAGGG GCCAAGAGGG TGGGGTGCAC CAGGCTCTCT 000720 000721 TTTTTTCCCA GCTCCCCTCT CCGAGGAGCT GTGCCCATGA GCACCAAGCG GCGCCTGGAG GAGGAGCAGT GAGTTTGGGG 000800 000801 GCAGGGAGGG ACTCCCAACA AGATCTCTGT CACCTCTGGT CCCCAACAGG CTGCCTCCTG TGTCAGTATC CCAGCCTGCC 000880 000881 TCTCTGCCAT CTCTCCCCAG GGAGCCTCTG CGCAAGCAGT TTCTGTCTGA GGAGAACATG GCCACCCACT TCTCTCAACT 000960 000961 CAGCCTGCAC AATGACCACC CCTACTGCAG CCCCCCCATG ACCTTCTCCC CAGCCCTGCC CCCACTCAGG AGCCCTTGCT 001040 001041 CTGAGCTGCT TCTCTGGCGC TATCCTGGCA GCCTCATCCC TGAGGCCCTC CGTCTGCTGA GGCTGGGGGA CACCCCCAGT 001120 001121 CCCCCCTACC CTGCAACCCC AGCTGGGGAC ATAATGGAGC TCTGAGTGCT GGTGGACAGT GCCCCTCCCA CCTTCCTTCT 001200 001201 TCCCCACAAC AGAAGAGACC AGCGACTCCC GCAAAGGGAC AAGGTTCCTC CCTCTCCTGC AGAGTAGGCA TCTGGGCACC 001280 001281 AAGACCTTCC CTCAACAGAG GACACTGAGC CCAACGGAGT TCTGGGATGG GAGGGGTGGG AGCATGGGAA GGGAGGCATC 001360 001361 CCACC |
Predicted Small Protein
Name | NONHSAT147915_smProtein_539:667 |
Length | 43 |
Molecular weight | 4971.6787 |
Aromaticity | 0.0952380952381 |
Instability index | 64.3785714286 |
Isoelectric point | 5.57366943359 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0250334367981 |
Amino acid sequence | MGLGLRLRVETSEVPCWMVQESGDRHQLRQEWAWGSWLMLQA |
Secondary structure | LLLLEEEEEELLLLLLHHHHLLLLHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |