NONHSAT148079
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT148079 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
553 nt |
Genomic location |
chr16-:3790444..3795655 |
Exon number |
3 |
Exons |
3790444..3790550,3794895..3794962,3795278..3795655 |
Genome context |
|
Sequence |
000001 GAAATATGTA TTTGTCGCAG CAATTTTTAA AAAGTAAAGT TTCCTTTCTG GTTGCAAAGG GAGATTGGGA GAAAAGAGGA 000080
000081 ATGAAGCGCT TGTACAAACA AAAGAAGAAA GCTTTTTCCT GTAGAAGATA TCATACGGAT GCATTGTAAA ATATAGCTGA 000160 000161 ATCAGCCAAC ACACGCATTA ATGTCAGCAC TACTCAAAGT AACCCAGAGA ACAAGGTGTG GACGCACACA CAGACTTCTA 000240 000241 CAAGTGACTC TGGTCTTGTG GTTCCGTGTG CTTTAACAGT GCGCCTTCTT TGCCTCCTAG TTTCGTTGAT TGCAAGGAGT 000320 000321 GTGGCCGGAA GATGCATCAG ATTTGCGTTC TGCACTATGA CATCATTTGG CCTTCAGGTT TTGTGTGCGA CAACTGCTTG 000400 000401 AAGAAAACTG GCAGACCTCG AAAAGAAAAC AAATTCAGTG CTAAGAGGCT GCAGACCACA AGACTGGGAA ACCACTTGGA 000480 000481 AGACCGAGTG AACAAATTTT TGCGGCGCCA GAATCACCCT GAAGCCGGGG AGGTTTTTGT CCGAGTGGTG GCC |
Predicted Small Protein
Name | NONHSAT148079_smProtein_5:148 |
Length | 48 |
Molecular weight | 5700.7097 |
Aromaticity | 0.148936170213 |
Instability index | 51.6340425532 |
Isoelectric point | 10.2963256836 |
Runs | 6 |
Runs residual | 0.0386170212766 |
Runs probability | 0.0293823235 |
Amino acid sequence | MYLSQQFLKSKVSFLVAKGDWEKRGMKRLYKQKKKAFSCRRYHTDAL |
Secondary structure | LLHHHHHHHHHHEEEEELLLHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |