NONHSAT148158
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT148158 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
651 nt |
Genomic location |
chr16+:4718298..4727327 |
Exon number |
4 |
Exons |
4718298..4718313,4721392..4721460,4723499..4723658,4726922..4727327 |
Genome context |
|
Sequence |
000001 AAAGCAGAAG CAAATTGTGG ACCGGGTCAG CTACCTCCTG CAGGAGATCT ATGGCATTGA GAACAAGAAC AACCAGGAGA 000080
000081 CCAAGCCCTC GGACGACGAG AACAGCGACA ACAGCAACGA GTGTGTGGTG TGCCTGTCCG ACCTGCGGGA CACGCTGATC 000160 000161 CTGCCCTGCC GCCACCTGTG CCTCTGTACC TCCTGCGCCG ACACGCTGCG CTACCAGGCC AACAACTGCC CCATCTGCCG 000240 000241 GCTGCTTTCC ACAGCATGAC ATCCCCACCT CAGCTTCCCC AGTGTGATGT CCCCGCCTGC CATCCTGTCC TGCAGCCAAG 000320 000321 AGCTCCTCTG GGCTCAGCCA GGACTGCTGA TTTGCAGTCA CGTCCTGTCT CGGGTGCAGC CTGGAGCTTC AGGGGTGTGA 000400 000401 CGCTTTGGGG GTCATGGCCA CCAGCCTCTT GGAAACACCC TCTGGAGCCC CGCCTTGGGC AGCACTGCAT GGCCTTGCTG 000480 000481 TGTTTCCTGC CCGGGGCCAT TTCATTAATA CTGTGTTTGC Gggagttctg tctctcgtct ttggagcgcc ccctccctct 000560 000561 atttctgtac aggggagctg cttctttctt tcttccccca tctttcctgc ctattaaatt cctgctcctt aaaactaAAA 000640 000641 GAAAAAAAAA A |
Predicted Small Protein
Name | NONHSAT148158_smProtein_413:616 |
Length | 68 |
Molecular weight | 6916.9708 |
Aromaticity | 0.134328358209 |
Instability index | 46.7746268657 |
Isoelectric point | 6.68890380859 |
Runs | 13 |
Runs residual | 0.0507150113308 |
Runs probability | 0.0493185493186 |
Amino acid sequence | MATSLLETPSGAPPWAALHGLAVFPARGHFINTVFAGVLSLVFGAPPPSISVQGSCFFLS SPIFPAY |
Secondary structure | LLLLLLLLLLLLLHHHHHLLLEEELLLLLEEHHHHHHHHEEEELLLLLLEEEELEEEEEL LLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHH HHHHHLL |
PiMo | oooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTT TTTTToo |