Difference between revisions of "NONHSAT022078"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGTGCTTGTAGTCCCAGCTACTCCTGAGGCTGAGGCAGGGGAATCGCTTGAACCCGGGAGGTGGAGGCTGCAGTTAGCCGAGATCGCGCCACCGNTCTCCAGCCTGCGAGCCTGGGCCACAGAGAGAAACTCCACCTCAAAAAGATAAATAGAAAGCAGCATTTAAGAAATATCTGAGCTCCTATGATTTTTTTCCTCCAAAACTGCCTCTTCTTTTCATTAAGTATCTTCTCATTAAATACCACTATTCATCCATCTTATTAAGTGCAGGCCCCATTCTAGGTGCCAAGAACACAATGCACATCAAAGGGAGCCGGGGGTCCCTGTTCTAATAGAGCTCACTCTTGTGGTGGAGTGGGGGGTGTGATGAACCAAACTGTGAGTGTTCTTTGCATCCCTGCTACTACTGGTGGTCTAAGCTTCCTGACCCCTCATGTGGATGACAACACATTAAGTGTTTTTCCTAACTTTCTTGCCAGCCCTCCAGAAAAACCTGCCAGAGAAATTAGATCACAAGTCAGATGAGATCCATCTGTTACTCAAAACCCTTCTGCGACCCTCCATTGCACTTGGACTCAAACCCAAACTCCTCTCTATGGCTGACAAGGCCTTGCAGGATCTGCCCGCCCCCAGCCCTAGACATCACCTCTTCCCATCTTCACACAGTCCTCTAGGCTTGAAATATTCCCCTACCTGATCACTTGACTGGGTCATCTCAGGTCTCACTCACGTCATTTAAACAGGACCTCTCGGCTGGCACAGCGGCTGACACCTGTAATCTTCAACACTTTGGGAGGGCAA</dnaseq>| | sequence = <dnaseq>GGTGCTTGTAGTCCCAGCTACTCCTGAGGCTGAGGCAGGGGAATCGCTTGAACCCGGGAGGTGGAGGCTGCAGTTAGCCGAGATCGCGCCACCGNTCTCCAGCCTGCGAGCCTGGGCCACAGAGAGAAACTCCACCTCAAAAAGATAAATAGAAAGCAGCATTTAAGAAATATCTGAGCTCCTATGATTTTTTTCCTCCAAAACTGCCTCTTCTTTTCATTAAGTATCTTCTCATTAAATACCACTATTCATCCATCTTATTAAGTGCAGGCCCCATTCTAGGTGCCAAGAACACAATGCACATCAAAGGGAGCCGGGGGTCCCTGTTCTAATAGAGCTCACTCTTGTGGTGGAGTGGGGGGTGTGATGAACCAAACTGTGAGTGTTCTTTGCATCCCTGCTACTACTGGTGGTCTAAGCTTCCTGACCCCTCATGTGGATGACAACACATTAAGTGTTTTTCCTAACTTTCTTGCCAGCCCTCCAGAAAAACCTGCCAGAGAAATTAGATCACAAGTCAGATGAGATCCATCTGTTACTCAAAACCCTTCTGCGACCCTCCATTGCACTTGGACTCAAACCCAAACTCCTCTCTATGGCTGACAAGGCCTTGCAGGATCTGCCCGCCCCCAGCCCTAGACATCACCTCTTCCCATCTTCACACAGTCCTCTAGGCTTGAAATATTCCCCTACCTGATCACTTGACTGGGTCATCTCAGGTCTCACTCACGTCATTTAAACAGGACCTCTCGGCTGGCACAGCGGCTGACACCTGTAATCTTCAACACTTTGGGAGGGCAA</dnaseq>| | ||
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− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG008656]] |
Revision as of 13:48, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT022078 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
801 nt |
Genomic location |
chr11+:64885782..64886583 |
Exon number |
1 |
Exons |
64885782..64886583 |
Genome context |
|
Sequence |
000001 GGTGCTTGTA GTCCCAGCTA CTCCTGAGGC TGAGGCAGGG GAATCGCTTG AACCCGGGAG GTGGAGGCTG CAGTTAGCCG 000080
000081 AGATCGCGCC ACCGNTCTCC AGCCTGCGAG CCTGGGCCAC AGAGAGAAAC TCCACCTCAA AAAGATAAAT AGAAAGCAGC 000160 000161 ATTTAAGAAA TATCTGAGCT CCTATGATTT TTTTCCTCCA AAACTGCCTC TTCTTTTCAT TAAGTATCTT CTCATTAAAT 000240 000241 ACCACTATTC ATCCATCTTA TTAAGTGCAG GCCCCATTCT AGGTGCCAAG AACACAATGC ACATCAAAGG GAGCCGGGGG 000320 000321 TCCCTGTTCT AATAGAGCTC ACTCTTGTGG TGGAGTGGGG GGTGTGATGA ACCAAACTGT GAGTGTTCTT TGCATCCCTG 000400 000401 CTACTACTGG TGGTCTAAGC TTCCTGACCC CTCATGTGGA TGACAACACA TTAAGTGTTT TTCCTAACTT TCTTGCCAGC 000480 000481 CCTCCAGAAA AACCTGCCAG AGAAATTAGA TCACAAGTCA GATGAGATCC ATCTGTTACT CAAAACCCTT CTGCGACCCT 000560 000561 CCATTGCACT TGGACTCAAA CCCAAACTCC TCTCTATGGC TGACAAGGCC TTGCAGGATC TGCCCGCCCC CAGCCCTAGA 000640 000641 CATCACCTCT TCCCATCTTC ACACAGTCCT CTAGGCTTGA AATATTCCCC TACCTGATCA CTTGACTGGG TCATCTCAGG 000720 000721 TCTCACTCAC GTCATTTAAA CAGGACCTCT CGGCTGGCAC AGCGGCTGAC ACCTGTAATC TTCAACACTT TGGGAGGGCA 000800 000801 A |
Predicted Small Protein
Name | NONHSAT022078_smProtein_521:673 |
Length | 51 |
Molecular weight | 5631.5138 |
Aromaticity | 0.06 |
Instability index | 61.556 |
Isoelectric point | 7.72479248047 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.00475685769802 |
Amino acid sequence | MRSICYSKPFCDPPLHLDSNPNSSLWLTRPCRICPPPALDITSSHLHTVL |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLHHHLLL |
PRMN | - |
PiMo | - |