Difference between revisions of "NONHSAT096874"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TGCAAATCAAAACCACAATGAGATACTTTCTCACACCATCAGAATGATTATTCTTGAAAAGTCAAAAAATAACAGATGCTGGTGATGTTGTGGATTGTTGTCTCTGGCAGCCATGAAGGCACTTCACTCAGATTTTCCTCCGACAAGACCTGCTGCAGGAGCTCAGCTGATGGCCCACAGTGGCAGGGCAGCTAGCTTACTAGTGCACTTTTACTGTGTGCACTACCACACTTTCTACCATTGACTATGAATAATGTCTGTTTTAAAGTATGATAAAACTTTTTCCAGCAATAAACAAATCAGAAAACATTTGTTACTATGTACAAGGTTCTGTGTTAGGTTTAGTAATCTACATGTGCATCTCCCAAGCTGTCCCCATAGAATGTTTATTATATATTATTTAGCATTCTATCTCTAACACTCTTTTTAGGCAGTTTTTGCTTGTTTGGCCTTCAGAGTCTCATTAAGATATCATTTATAATTAGGTGGGGAAAGCATACATTGTCCAAATCAAAAGGAAAGTATTCTGTGTTCCTGTTTAAGTGCCCATTTAAATTGATGCTGAAGTTTTCAAC</dnaseq>| | sequence = <dnaseq>TGCAAATCAAAACCACAATGAGATACTTTCTCACACCATCAGAATGATTATTCTTGAAAAGTCAAAAAATAACAGATGCTGGTGATGTTGTGGATTGTTGTCTCTGGCAGCCATGAAGGCACTTCACTCAGATTTTCCTCCGACAAGACCTGCTGCAGGAGCTCAGCTGATGGCCCACAGTGGCAGGGCAGCTAGCTTACTAGTGCACTTTTACTGTGTGCACTACCACACTTTCTACCATTGACTATGAATAATGTCTGTTTTAAAGTATGATAAAACTTTTTCCAGCAATAAACAAATCAGAAAACATTTGTTACTATGTACAAGGTTCTGTGTTAGGTTTAGTAATCTACATGTGCATCTCCCAAGCTGTCCCCATAGAATGTTTATTATATATTATTTAGCATTCTATCTCTAACACTCTTTTTAGGCAGTTTTTGCTTGTTTGGCCTTCAGAGTCTCATTAAGATATCATTTATAATTAGGTGGGGAAAGCATACATTGTCCAAATCAAAAGGAAAGTATTCTGTGTTCCTGTTTAAGTGCCCATTTAAATTGATGCTGAAGTTTTCAAC</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:Transcripts]] |
Revision as of 09:27, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT096874 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
575 nt |
| Genomic location |
chr4+:74794883..74799108 |
| Exon number |
3 |
| Exons |
74794883..74794976,74797918..74798036,74798747..74799108 |
| Genome context |
|
| Sequence |
000001 TGCAAATCAA AACCACAATG AGATACTTTC TCACACCATC AGAATGATTA TTCTTGAAAA GTCAAAAAAT AACAGATGCT 000080
000081 GGTGATGTTG TGGATTGTTG TCTCTGGCAG CCATGAAGGC ACTTCACTCA GATTTTCCTC CGACAAGACC TGCTGCAGGA 000160 000161 GCTCAGCTGA TGGCCCACAG TGGCAGGGCA GCTAGCTTAC TAGTGCACTT TTACTGTGTG CACTACCACA CTTTCTACCA 000240 000241 TTGACTATGA ATAATGTCTG TTTTAAAGTA TGATAAAACT TTTTCCAGCA ATAAACAAAT CAGAAAACAT TTGTTACTAT 000320 000321 GTACAAGGTT CTGTGTTAGG TTTAGTAATC TACATGTGCA TCTCCCAAGC TGTCCCCATA GAATGTTTAT TATATATTAT 000400 000401 TTAGCATTCT ATCTCTAACA CTCTTTTTAG GCAGTTTTTG CTTGTTTGGC CTTCAGAGTC TCATTAAGAT ATCATTTATA 000480 000481 ATTAGGTGGG GAAAGCATAC ATTGTCCAAA TCAAAAGGAA AGTATTCTGT GTTCCTGTTT AAGTGCCCAT TTAAATTGAT 000560 000561 GCTGAAGTTT TCAAC |
Predicted Small Protein
| Name | NONHSAT096874_smProtein_269:403 |
| Length | 45 |
| Molecular weight | 4968.0323 |
| Aromaticity | 0.113636363636 |
| Instability index | 80.3090909091 |
| Isoelectric point | 5.88934326172 |
| Runs | 8 |
| Runs residual | 0.0187165775401 |
| Runs probability | 0.0293565624448 |
| Amino acid sequence | MIKLFPAINKSENICYYVQGSVLGLVIYMCISQAVPIECLLYII |
| Secondary structure | LLEEELLLLLLLLEEEHHHHHHHHHHHHLLLLLLLLHHHHHHLL |
| PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLL |
| PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToooo |
