Difference between revisions of "NONHSAT141047"
Line 42: | Line 42: | ||
sequence = <dnaseq>GCTGAGTTGCTTGGAGGAGCTTGGAGAAACCAGAAGTGAGATCCAGGAGAAGTAAGGCCCTGGAGTGCCAGGAGCCCTTCTCCCAAAGATGGAGAAATAAATGAAGAAATACAGGAAAATAAGCATTGGGTGTTTTGCAATGGCTACACAAACTAGTCATGTCTTCCATGGTCAAGAAAATATGTTTCTGGAAAACCATTGAGGCTGCAGGGGAGTGAGACCCAGTCTTCAGATTGGGAGGACTCTGAAGACTGGCTTTCGGCTCACAGTTTAAAATGTCAGAAACTCACCTTGGCTGACCTGATAAGCCAGGGCACAGAAGTGCTGTAAGTCTGAAGCTGTTCCCCGCACCCCCCACAGCTGCAGTGACACATGCAACCCCCTGGGCCCGAGAGATCCCCTCATAAGGCTTTGCTTCTTCAGGGAGGAGGGCACCAATGTCGTGCAGAAAATATGTTTCTCCACCCAGATCATCCGCCATTTTGAGTCAAAGCTTTCTGACACTATTGAAGTCTATCAAGAGAGAATTCAGTGGCTCACAGAAAACAGCAAGAAGAGCCTCATCGATGAGCAGCTGAGCC</dnaseq>| | sequence = <dnaseq>GCTGAGTTGCTTGGAGGAGCTTGGAGAAACCAGAAGTGAGATCCAGGAGAAGTAAGGCCCTGGAGTGCCAGGAGCCCTTCTCCCAAAGATGGAGAAATAAATGAAGAAATACAGGAAAATAAGCATTGGGTGTTTTGCAATGGCTACACAAACTAGTCATGTCTTCCATGGTCAAGAAAATATGTTTCTGGAAAACCATTGAGGCTGCAGGGGAGTGAGACCCAGTCTTCAGATTGGGAGGACTCTGAAGACTGGCTTTCGGCTCACAGTTTAAAATGTCAGAAACTCACCTTGGCTGACCTGATAAGCCAGGGCACAGAAGTGCTGTAAGTCTGAAGCTGTTCCCCGCACCCCCCACAGCTGCAGTGACACATGCAACCCCCTGGGCCCGAGAGATCCCCTCATAAGGCTTTGCTTCTTCAGGGAGGAGGGCACCAATGTCGTGCAGAAAATATGTTTCTCCACCCAGATCATCCGCCATTTTGAGTCAAAGCTTTCTGACACTATTGAAGTCTATCAAGAGAGAATTCAGTGGCTCACAGAAAACAGCAAGAAGAGCCTCATCGATGAGCAGCTGAGCC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG018861]] | + | [[Category:Sense]][[Category:NONHSAG018861]][[Category:Transcripts]] |
Latest revision as of 03:01, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT141047 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
581 nt |
Genomic location |
chr16+:22103859..22122233 |
Exon number |
5 |
Exons |
22103859..22103972,22108180..22108266,22111515..22111814,22114796..22114850,22122209..22122233 |
Genome context |
|
Sequence |
000001 GCTGAGTTGC TTGGAGGAGC TTGGAGAAAC CAGAAGTGAG ATCCAGGAGA AGTAAGGCCC TGGAGTGCCA GGAGCCCTTC 000080
000081 TCCCAAAGAT GGAGAAATAA ATGAAGAAAT ACAGGAAAAT AAGCATTGGG TGTTTTGCAA TGGCTACACA AACTAGTCAT 000160 000161 GTCTTCCATG GTCAAGAAAA TATGTTTCTG GAAAACCATT GAGGCTGCAG GGGAGTGAGA CCCAGTCTTC AGATTGGGAG 000240 000241 GACTCTGAAG ACTGGCTTTC GGCTCACAGT TTAAAATGTC AGAAACTCAC CTTGGCTGAC CTGATAAGCC AGGGCACAGA 000320 000321 AGTGCTGTAA GTCTGAAGCT GTTCCCCGCA CCCCCCACAG CTGCAGTGAC ACATGCAACC CCCTGGGCCC GAGAGATCCC 000400 000401 CTCATAAGGC TTTGCTTCTT CAGGGAGGAG GGCACCAATG TCGTGCAGAA AATATGTTTC TCCACCCAGA TCATCCGCCA 000480 000481 TTTTGAGTCA AAGCTTTCTG ACACTATTGA AGTCTATCAA GAGAGAATTC AGTGGCTCAC AGAAAACAGC AAGAAGAGCC 000560 000561 TCATCGATGA GCAGCTGAGC C |
Predicted Small Protein
Name | NONHSAT141047_smProtein_437:577 |
Length | 47 |
Molecular weight | 5096.8658 |
Aromaticity | 0.0652173913043 |
Instability index | 108.147826087 |
Isoelectric point | 11.481628418 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.020163020163 |
Amino acid sequence | MSCRKYVSPPRSSAILSQSFLTLLKSIKREFSGSQKTARRASSMSS |
Secondary structure | LLLEEELLLLLLHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHLLLL |
PRMN | - |
PiMo | - |