Difference between revisions of "ELFN1-AS1"
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===Function=== | ===Function=== | ||
ELFN1-AS1 is translated and functions as a protein.<ref name="ref1" /> | ELFN1-AS1 is translated and functions as a protein.<ref name="ref1" /> | ||
+ | ELFN1-AS1 codes for a miRNA and its function is related to regulation of gene expression.<ref name="ref1" /> | ||
+ | ELFN1-AS1 may have similar function with ELFN1, which is selectively expressed by O-LM interneurons and directs the formation of highly facilitating pyramidal-O-LM synapses.<ref name="ref1" /> | ||
===Expression=== | ===Expression=== |
Latest revision as of 15:09, 1 December 2017
Contents
Annotated Information
Approved Symbol
ELFN1-AS1 (ELFN1 antisense RNA 1)
Chromosome
7p22.3
RefSeq ID
NR_120510
Ensembl ID
ENSG00000236081
Characteristics
ELFN1-AS1 has its own promoter and it is a subject of a complex regulation by various TFs, c-Myc/Max and E2F family proteins in particular.[1]
Function
ELFN1-AS1 is translated and functions as a protein.[1] ELFN1-AS1 codes for a miRNA and its function is related to regulation of gene expression.[1] ELFN1-AS1 may have similar function with ELFN1, which is selectively expressed by O-LM interneurons and directs the formation of highly facilitating pyramidal-O-LM synapses.[1]
Expression
ELFN1-AS1 is abundant in tumors, but seems to be weak and specific to liver, heart, and stomach[1]
Labs working on this lncRNA
- Biomedical Center, 8 Vyborgskaja Street, Saint Petersburg 194044, Russia ; Department of Genetics and Breeding, Saint Petersburg State University, 7/9 Universitetskaya Embankment, Saint Petersburg 199034, Russia.
- Biomedical Center, 8 Vyborgskaja Street, Saint Petersburg 194044, Russia.
References
Sequence
>gi|641386973|ref|NR_120510.1| Homo sapiens ELFN1 antisense RNA 1 (ELFN1-AS1), transcript variant 3, long non-coding RNA
000081 CTCAAAATAA CCCAAAGTCA AGCCAGAGGG AGCCTCGCTA ACCACCAAGG CGGTCCTGCG GCCCCGCGCA GCCCTGAGGG 000160
000161 CGTCCAGTCC TCCACGCGTG GAGGAGAATC CGGCCTCCAG ACACAATCTC CAGGGCCCAC TGGATGGGCC TCCGCTCCTT 000240
000241 CTCACTCCCA GTCCTCTGGT GCATGCCCCC TTCCTGGCTG AAGAACCTGC ACCAGCCGCC CCTCCGCCTG GGAAGCTCCC 000320
000321 TCCTGTCATT CACTCCGAGA CGCAGCAGCG TTGCCCCAAG AGCCCTCCCT GCTCTGCACC CCGAATTCAC TCTCAGCCCC 000400
000401 CACCTAGTTT AAATCCTGGC CCTTCTCTCT CCCTGATGTT CTGCTTGGTT ATTTACTTTT AATTCATGTT GGAGCTCCTC 000480
000481 CTGCCACTGC AAGAGCAGGA GCTGTGTGTC CTGGTCACTG CTGTGGCATC CCAGGGCCGG CGCGGTGCCC AGCAGCCAGG 000560
000561 ACTGGACAGA CTCGGGCCAC GCTGCGCACG GGCTGGGATG CGCTGGCTCT GCTTCCTCTT CCGTTGAATG GGAGTAAAGA 000640
000641 CCACTCCTCC CAGGGAGCTT GTGGTTTCTC ACAAA