Difference between revisions of "NONHSAT120823"
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sequence = <dnaseq>GGACAACACCTGCTCCCAGGCAAAAGGAGTTTGTTAAGACATTGCATTAAATAGCAAGATGGCAGATGAACATCAGGAAAGAACATTAGGAACATCCACAGTGTTCCATCCAGGAACCTTCACCATGGAAACCCTTGTGCTCATGGGCCTGGTCTCAAGACACATTCAGCTGTTGGGGATCAGAGGCCGCACTCATCGTAGCAGAGAGGCAGGACCAACTGGGAGAGGGTCATTCTGTGACACCTACTGCATCACCGGGCTGTGTGAAGTGACTCAGCTGCCAGAACTCACACAATATCATTCTACACCAAAACCTCACGGGAAAAATCCTCCCCGAccctcagacttaaacagcagcactggctcctccccagatctccagctccctgaccctcaaactccaactgcagcaccagctccacctgggtctccagctccatgatcctcaaactacaacagcagcaccagctcccccgtggatctccagctcaatgactctcagacttgggaGGTGGCACTGGCTCCCAACCAAGGCTCcagctccacaaacctcaaactagaacagcagcaccagctactccctgggtctccagctccctcaaacttcaactatagcactggctcttccctgggGCCACCAGCTCCACAACCCTCAACTTACACGGTGGTAGCACCAGCTCCTCCCCAGGTCTCCAGCTCCACGACCATCAAACTTGAACTGCAACACCAGCTCCTCTTCAGCCTCCAGCTCCACAATCCTCCAACAACAACAGCAACACTGGCTCCTCCCTGAATCTCCAGCTCAACAACTCACAGACTTGAGAGGCAGCACCGGCACCTCCCCAAGGCTCCAGCTCCATGACCCTCAGATTTGAACAGTGGTAGCACCAGCTCCTGTCCAGGTCTCCAGCTTCACTATCCTTAAACTAGAACAGCAGCACCGCCGCCTCCCTGGGTTTCCAGCTCCATGACTCTAAGACATGAATGAAAGAACCGGGTCACCCCAGCACTCCAACTCCAAGACCCACagatttgaacggcagcactggctcttcccgggatctccagctccacggccctcaaactagatcagcagcaccggctcctctctggttctccagctccacaatcctcacacatgaacaatagtaccagctcctccttgggtctccagcttcactaccctcagactagaacagcaacactggttcctccgtggacctccagctctacaaTCCTCAGAAATGAACAGCAGCAGCACCGCCTCCTACCTTTGTCTCCACTTCCACAACCCTCAAACTACAACAGCAGTACCGGCCTCTCCCCAGGTCTCCACATACATGACCCTCAAAATAGAATGGCATCATAGGCTCCCTCCTGGATCTCCAGCTCCCAAACCCTCAAACTTCAATTGACACACCAGATCCTCCCCACAGCTAAATAGCAGCACGGGCTCTTCCCCAAAGCTCCAGATCCACGAACCTCTGACTTAAGTGGCGGTAGCACCGGCTCCTCCCTAGGTCTCCAGTTCCACGACCCTCAAACTATACACCAGCACCAGCTCCTCCCCAGGTCTCAGGCTCCATGACCCTCAGACTTAAAAAGCCATAGTATGGACTTCTCCCTGGGGCTCCAGCTCTACAACCCTCAGACATGAACAGCAGCAGCACCGGCTCCTCGCCCTGTCTCCACTTCCACGACCCTCAAACTACAACAACAGTACCAGCCTCTCCCCAGGTCTCCAGATCCACGACCCTCAAAATAGAATGGCATCACCGGCTCCTCCCTGGGTCTCCAGCTCCCAAACCCTCAAACTTCAATTGACACACCAGATCCTCCCCACAGTTAAACAGCAGCACGGGCTGTTCCCCAAAGCTCCAGATCCATGACCCTCTGACTTAAATGGCGGTAGCACCGGctccttcctaggtctgcagttccatgaccctcaaactacacagcagcaccggctcctccccaggtctacagctccacCACCCTCACACTAGACACCAAGACTACCTCCTCCCCACTCTCCAGCTACATGACCCTCAGACTTGAACAGCAGCGGCTCCTCCCTGTACCTAAAGCCCCATTATGCTCAGACTTGAACAACAGCAACACCAGCTCCCCCACAGGGCTCCAGCTCGAGGACCCACagatttaaacagcagcaccggctcttcctgtgacctccagctccactaacctcaaactagaacagcagcatcggctcctccttgggtctccagcttcactaccctcaggctagaacagcaacaccggttcctccctgggtctccagctcaatgactctcagatttgaaacgcagcaccggctcctcacaaagtttctggctccaaggccctcaaactataatagcagcagctgctgcaccctgggtctccagctccacaacccTCAAAGTAGAAAAGCAGCCCTGGCTCTTCCCCAGGTCTCCAGCTCCTCGAGTCTGAGGGttgtagagctggagacccagggaggagtcagtgctgctgttctagtttgagggtcgtggatctggagacccagggtggagccggtgctgctgttctagtgtgaaggtcatggagctggaagaccccggaaggatctgctgctgctgtcctagtttgaaggtcatggagctggagacccaggaaggagTCATTTGAACAGCAGCACTGGCCCCTCCCCAGgtctactgctccacCACCCTCACACTAGACACCAACACTACCTCCTCCCCGCTCTCCAGCTACACGACCCTCAGACTTGAACAGCAGCAGTGGCTCCTCCCTAGATTTCCAGCTCCATGACCCTCAACCTGCAACCGCAGCACGAGCTCTTCCCTGTACCTCAAGCCCCATGACCCTCTGACTTGAACAACAGCAACACCAGCCACCCCCAGGTCTCCAGCTCCACAACCCTCAGCCTTAAGCAACAGCAGCACCAGctcctccctgggtctccagattcacacccctcagattagaacagcacccctcctctctgagtctccagctccatgaccctcaaactacaacagcaacacgggctcctccctgcatctccagctcaacaaCTCTCAGACTTGAGAGGCGGCACCGGCAACTCCCCAAGGCTCCGGCTCCATGACCCTCAGATTTGAATAATGGTAGCACCATCTGCTATCCAGGTCTCCAGCTTCATGATCCTTAAACTAGAACAGCAGCACCACTGCCTCCCTGGATTTCCAGCTCCACGACCCTAAGACATGAATGGCAGAACTAGCTCCCCACCAGTTTTCCAGCTCCAGGACCCACAGATTTAAAGGACAGCACCAGctcttcccgggatctccagctccactaccctcaaactagaacagcagcactggctcctccctgggtctccagctcccaaaccatcaaactTCAACTGACACACAGGAACCTCCCCACAGTTAAACAGCAGCACGGGCTGTTCCCCAAAACTCCAGATCCACAACCTTCTGACTTAAATGGCAGTAGCACTGGctcctccctaggtctccagttccatgaccctcaaactacacagcagtaccagctcctccccaggtgtacagctccacCACCCTCACACTAGACACCAAGACTACCTCCTCCCCGCTCTCTAGCTACACGACCCTCAGACTTGAACAGCAGCAGCGGATCCTCCCTGTACCTCAAGCCCCATGACCTCGGATTTCAACAACAACAACACCAGCTCCTGCCTAGGGCTCCAGCTCCAGGACCCACagatttaaacgacggcaccggctctccccaggatctccagcgccactacccttaaactagaacagcagcaccgcctcctctctggttcttcagttccacaacactcaggcatgaacagcagcaccggctcttccttgggtctccagcttcactaccctcagactagaacagcaacacttgttcctccctggatctccagctcaatgactcccagacttgaaaggcagcaccaactcctccatggatctccagctccatgacactcaaaacaacatggctcctccctgggtctgcagctccaggaccctcgaactacaacaacattgttcctccctgggtctgcggctccatgatcctcaaactcgaacaagacctctcctccctgggtctccagcttccggaccctcaaattacaacaacattgctcctgcctgggtctgcagctccacgaccctcaaataagaacaagacctctcctccctgggtctccagcttcctgaccctcgaactacaacaacattgctcctgcctgggtctgtagctcgacaaccctcaaactagaacaagacctctcctccctgggtctccagcttccggaccctcgaattacaacaacaatgctcctgcctgggtctgcagctccattaccctcaaataacaacaagacctctcctccctgggtcgccagcttccggactcgaactacaacactgctcctccctggatctgtagctcgacgaCCCTTAGCTAGAacaagacctcttttccctggtttgccagcttccggaccctcaaactaaaacaacattgctcctgcctgggtctgcagctccacgaccctcaatctcaaacaagacctctcctccctgcgtcgtcagcttctggaccctcaaattacaacaacattgctcctgcctgggtctgcagctccatgaccctcaaataacaacaagacctctcctccctgggtcgccagcttcctgacccttgaattacaacaacattgcacctgcctgggcctgtagctcgatgaccctcgaactagaacaagaactctcctccctgagtcgccagcttcctgaccctcgaactacaacagcattgctcctccatgggtctgcagctccacaaccctgaaactagaacaagacctctcctccctgggtctgcagctccaccaccctcaccctagaacagcagcaccagctccttcctggacctCCAGCTCAATGACTCTCAGACTTCAAAGGCAGCACCAGCTCCACCCCCAGGCTCCAGCTCCAACACCCTCAGATTTGAGCAGCGACaacaccagctcctttctgggtcttctgtttcacgatccttaaattagaacagcagcaccatcttctccctgggtctccagctccatgagactcaagctagaatagcagcaccagctcctcttggatcttcagctCCACGACCCTAAGACATCAGTGGTAGCACCGGCTCCTCCCCTGGGCTCCAGCTCCAGGACCCTCAGACTTGAACAAAAACACCAGCTCCTCCCCAGGCCTCCAGCTCCTTGACCCTCATAAACAATCCCTTCTTATGAAATGTAGCAGTCAGGAAAACTGTAGAGGAAG</dnaseq>| | sequence = <dnaseq>GGACAACACCTGCTCCCAGGCAAAAGGAGTTTGTTAAGACATTGCATTAAATAGCAAGATGGCAGATGAACATCAGGAAAGAACATTAGGAACATCCACAGTGTTCCATCCAGGAACCTTCACCATGGAAACCCTTGTGCTCATGGGCCTGGTCTCAAGACACATTCAGCTGTTGGGGATCAGAGGCCGCACTCATCGTAGCAGAGAGGCAGGACCAACTGGGAGAGGGTCATTCTGTGACACCTACTGCATCACCGGGCTGTGTGAAGTGACTCAGCTGCCAGAACTCACACAATATCATTCTACACCAAAACCTCACGGGAAAAATCCTCCCCGAccctcagacttaaacagcagcactggctcctccccagatctccagctccctgaccctcaaactccaactgcagcaccagctccacctgggtctccagctccatgatcctcaaactacaacagcagcaccagctcccccgtggatctccagctcaatgactctcagacttgggaGGTGGCACTGGCTCCCAACCAAGGCTCcagctccacaaacctcaaactagaacagcagcaccagctactccctgggtctccagctccctcaaacttcaactatagcactggctcttccctgggGCCACCAGCTCCACAACCCTCAACTTACACGGTGGTAGCACCAGCTCCTCCCCAGGTCTCCAGCTCCACGACCATCAAACTTGAACTGCAACACCAGCTCCTCTTCAGCCTCCAGCTCCACAATCCTCCAACAACAACAGCAACACTGGCTCCTCCCTGAATCTCCAGCTCAACAACTCACAGACTTGAGAGGCAGCACCGGCACCTCCCCAAGGCTCCAGCTCCATGACCCTCAGATTTGAACAGTGGTAGCACCAGCTCCTGTCCAGGTCTCCAGCTTCACTATCCTTAAACTAGAACAGCAGCACCGCCGCCTCCCTGGGTTTCCAGCTCCATGACTCTAAGACATGAATGAAAGAACCGGGTCACCCCAGCACTCCAACTCCAAGACCCACagatttgaacggcagcactggctcttcccgggatctccagctccacggccctcaaactagatcagcagcaccggctcctctctggttctccagctccacaatcctcacacatgaacaatagtaccagctcctccttgggtctccagcttcactaccctcagactagaacagcaacactggttcctccgtggacctccagctctacaaTCCTCAGAAATGAACAGCAGCAGCACCGCCTCCTACCTTTGTCTCCACTTCCACAACCCTCAAACTACAACAGCAGTACCGGCCTCTCCCCAGGTCTCCACATACATGACCCTCAAAATAGAATGGCATCATAGGCTCCCTCCTGGATCTCCAGCTCCCAAACCCTCAAACTTCAATTGACACACCAGATCCTCCCCACAGCTAAATAGCAGCACGGGCTCTTCCCCAAAGCTCCAGATCCACGAACCTCTGACTTAAGTGGCGGTAGCACCGGCTCCTCCCTAGGTCTCCAGTTCCACGACCCTCAAACTATACACCAGCACCAGCTCCTCCCCAGGTCTCAGGCTCCATGACCCTCAGACTTAAAAAGCCATAGTATGGACTTCTCCCTGGGGCTCCAGCTCTACAACCCTCAGACATGAACAGCAGCAGCACCGGCTCCTCGCCCTGTCTCCACTTCCACGACCCTCAAACTACAACAACAGTACCAGCCTCTCCCCAGGTCTCCAGATCCACGACCCTCAAAATAGAATGGCATCACCGGCTCCTCCCTGGGTCTCCAGCTCCCAAACCCTCAAACTTCAATTGACACACCAGATCCTCCCCACAGTTAAACAGCAGCACGGGCTGTTCCCCAAAGCTCCAGATCCATGACCCTCTGACTTAAATGGCGGTAGCACCGGctccttcctaggtctgcagttccatgaccctcaaactacacagcagcaccggctcctccccaggtctacagctccacCACCCTCACACTAGACACCAAGACTACCTCCTCCCCACTCTCCAGCTACATGACCCTCAGACTTGAACAGCAGCGGCTCCTCCCTGTACCTAAAGCCCCATTATGCTCAGACTTGAACAACAGCAACACCAGCTCCCCCACAGGGCTCCAGCTCGAGGACCCACagatttaaacagcagcaccggctcttcctgtgacctccagctccactaacctcaaactagaacagcagcatcggctcctccttgggtctccagcttcactaccctcaggctagaacagcaacaccggttcctccctgggtctccagctcaatgactctcagatttgaaacgcagcaccggctcctcacaaagtttctggctccaaggccctcaaactataatagcagcagctgctgcaccctgggtctccagctccacaacccTCAAAGTAGAAAAGCAGCCCTGGCTCTTCCCCAGGTCTCCAGCTCCTCGAGTCTGAGGGttgtagagctggagacccagggaggagtcagtgctgctgttctagtttgagggtcgtggatctggagacccagggtggagccggtgctgctgttctagtgtgaaggtcatggagctggaagaccccggaaggatctgctgctgctgtcctagtttgaaggtcatggagctggagacccaggaaggagTCATTTGAACAGCAGCACTGGCCCCTCCCCAGgtctactgctccacCACCCTCACACTAGACACCAACACTACCTCCTCCCCGCTCTCCAGCTACACGACCCTCAGACTTGAACAGCAGCAGTGGCTCCTCCCTAGATTTCCAGCTCCATGACCCTCAACCTGCAACCGCAGCACGAGCTCTTCCCTGTACCTCAAGCCCCATGACCCTCTGACTTGAACAACAGCAACACCAGCCACCCCCAGGTCTCCAGCTCCACAACCCTCAGCCTTAAGCAACAGCAGCACCAGctcctccctgggtctccagattcacacccctcagattagaacagcacccctcctctctgagtctccagctccatgaccctcaaactacaacagcaacacgggctcctccctgcatctccagctcaacaaCTCTCAGACTTGAGAGGCGGCACCGGCAACTCCCCAAGGCTCCGGCTCCATGACCCTCAGATTTGAATAATGGTAGCACCATCTGCTATCCAGGTCTCCAGCTTCATGATCCTTAAACTAGAACAGCAGCACCACTGCCTCCCTGGATTTCCAGCTCCACGACCCTAAGACATGAATGGCAGAACTAGCTCCCCACCAGTTTTCCAGCTCCAGGACCCACAGATTTAAAGGACAGCACCAGctcttcccgggatctccagctccactaccctcaaactagaacagcagcactggctcctccctgggtctccagctcccaaaccatcaaactTCAACTGACACACAGGAACCTCCCCACAGTTAAACAGCAGCACGGGCTGTTCCCCAAAACTCCAGATCCACAACCTTCTGACTTAAATGGCAGTAGCACTGGctcctccctaggtctccagttccatgaccctcaaactacacagcagtaccagctcctccccaggtgtacagctccacCACCCTCACACTAGACACCAAGACTACCTCCTCCCCGCTCTCTAGCTACACGACCCTCAGACTTGAACAGCAGCAGCGGATCCTCCCTGTACCTCAAGCCCCATGACCTCGGATTTCAACAACAACAACACCAGCTCCTGCCTAGGGCTCCAGCTCCAGGACCCACagatttaaacgacggcaccggctctccccaggatctccagcgccactacccttaaactagaacagcagcaccgcctcctctctggttcttcagttccacaacactcaggcatgaacagcagcaccggctcttccttgggtctccagcttcactaccctcagactagaacagcaacacttgttcctccctggatctccagctcaatgactcccagacttgaaaggcagcaccaactcctccatggatctccagctccatgacactcaaaacaacatggctcctccctgggtctgcagctccaggaccctcgaactacaacaacattgttcctccctgggtctgcggctccatgatcctcaaactcgaacaagacctctcctccctgggtctccagcttccggaccctcaaattacaacaacattgctcctgcctgggtctgcagctccacgaccctcaaataagaacaagacctctcctccctgggtctccagcttcctgaccctcgaactacaacaacattgctcctgcctgggtctgtagctcgacaaccctcaaactagaacaagacctctcctccctgggtctccagcttccggaccctcgaattacaacaacaatgctcctgcctgggtctgcagctccattaccctcaaataacaacaagacctctcctccctgggtcgccagcttccggactcgaactacaacactgctcctccctggatctgtagctcgacgaCCCTTAGCTAGAacaagacctcttttccctggtttgccagcttccggaccctcaaactaaaacaacattgctcctgcctgggtctgcagctccacgaccctcaatctcaaacaagacctctcctccctgcgtcgtcagcttctggaccctcaaattacaacaacattgctcctgcctgggtctgcagctccatgaccctcaaataacaacaagacctctcctccctgggtcgccagcttcctgacccttgaattacaacaacattgcacctgcctgggcctgtagctcgatgaccctcgaactagaacaagaactctcctccctgagtcgccagcttcctgaccctcgaactacaacagcattgctcctccatgggtctgcagctccacaaccctgaaactagaacaagacctctcctccctgggtctgcagctccaccaccctcaccctagaacagcagcaccagctccttcctggacctCCAGCTCAATGACTCTCAGACTTCAAAGGCAGCACCAGCTCCACCCCCAGGCTCCAGCTCCAACACCCTCAGATTTGAGCAGCGACaacaccagctcctttctgggtcttctgtttcacgatccttaaattagaacagcagcaccatcttctccctgggtctccagctccatgagactcaagctagaatagcagcaccagctcctcttggatcttcagctCCACGACCCTAAGACATCAGTGGTAGCACCGGCTCCTCCCCTGGGCTCCAGCTCCAGGACCCTCAGACTTGAACAAAAACACCAGCTCCTCCCCAGGCCTCCAGCTCCTTGACCCTCATAAACAATCCCTTCTTATGAAATGTAGCAGTCAGGAAAACTGTAGAGGAAG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG047689]] | + | [[Category:Intergenic]][[Category:NONHSAG047689]][[Category:Transcripts]] |
Latest revision as of 06:34, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT120823 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
5372 nt |
Genomic location |
chr7-:57283841..57290153 |
Exon number |
4 |
Exons |
57283841..57286512,57286918..57289288,57289731..57290024,57290119..57290153 |
Genome context |
|
Sequence |
000001 GGACAACACC TGCTCCCAGG CAAAAGGAGT TTGTTAAGAC ATTGCATTAA ATAGCAAGAT GGCAGATGAA CATCAGGAAA 000080
000081 GAACATTAGG AACATCCACA GTGTTCCATC CAGGAACCTT CACCATGGAA ACCCTTGTGC TCATGGGCCT GGTCTCAAGA 000160 000161 CACATTCAGC TGTTGGGGAT CAGAGGCCGC ACTCATCGTA GCAGAGAGGC AGGACCAACT GGGAGAGGGT CATTCTGTGA 000240 000241 CACCTACTGC ATCACCGGGC TGTGTGAAGT GACTCAGCTG CCAGAACTCA CACAATATCA TTCTACACCA AAACCTCACG 000320 000321 GGAAAAATCC TCCCCGAccc tcagacttaa acagcagcac tggctcctcc ccagatctcc agctccctga ccctcaaact 000400 000401 ccaactgcag caccagctcc acctgggtct ccagctccat gatcctcaaa ctacaacagc agcaccagct cccccgtgga 000480 000481 tctccagctc aatgactctc agacttggga GGTGGCACTG GCTCCCAACC AAGGCTCcag ctccacaaac ctcaaactag 000560 000561 aacagcagca ccagctactc cctgggtctc cagctccctc aaacttcaac tatagcactg gctcttccct gggGCCACCA 000640 000641 GCTCCACAAC CCTCAACTTA CACGGTGGTA GCACCAGCTC CTCCCCAGGT CTCCAGCTCC ACGACCATCA AACTTGAACT 000720 000721 GCAACACCAG CTCCTCTTCA GCCTCCAGCT CCACAATCCT CCAACAACAA CAGCAACACT GGCTCCTCCC TGAATCTCCA 000800 000801 GCTCAACAAC TCACAGACTT GAGAGGCAGC ACCGGCACCT CCCCAAGGCT CCAGCTCCAT GACCCTCAGA TTTGAACAGT 000880 000881 GGTAGCACCA GCTCCTGTCC AGGTCTCCAG CTTCACTATC CTTAAACTAG AACAGCAGCA CCGCCGCCTC CCTGGGTTTC 000960 000961 CAGCTCCATG ACTCTAAGAC ATGAATGAAA GAACCGGGTC ACCCCAGCAC TCCAACTCCA AGACCCACag atttgaacgg 001040 001041 cagcactggc tcttcccggg atctccagct ccacggccct caaactagat cagcagcacc ggctcctctc tggttctcca 001120 001121 gctccacaat cctcacacat gaacaatagt accagctcct ccttgggtct ccagcttcac taccctcaga ctagaacagc 001200 001201 aacactggtt cctccgtgga cctccagctc tacaaTCCTC AGAAATGAAC AGCAGCAGCA CCGCCTCCTA CCTTTGTCTC 001280 001281 CACTTCCACA ACCCTCAAAC TACAACAGCA GTACCGGCCT CTCCCCAGGT CTCCACATAC ATGACCCTCA AAATAGAATG 001360 001361 GCATCATAGG CTCCCTCCTG GATCTCCAGC TCCCAAACCC TCAAACTTCA ATTGACACAC CAGATCCTCC CCACAGCTAA 001440 001441 ATAGCAGCAC GGGCTCTTCC CCAAAGCTCC AGATCCACGA ACCTCTGACT TAAGTGGCGG TAGCACCGGC TCCTCCCTAG 001520 001521 GTCTCCAGTT CCACGACCCT CAAACTATAC ACCAGCACCA GCTCCTCCCC AGGTCTCAGG CTCCATGACC CTCAGACTTA 001600 001601 AAAAGCCATA GTATGGACTT CTCCCTGGGG CTCCAGCTCT ACAACCCTCA GACATGAACA GCAGCAGCAC CGGCTCCTCG 001680 001681 CCCTGTCTCC ACTTCCACGA CCCTCAAACT ACAACAACAG TACCAGCCTC TCCCCAGGTC TCCAGATCCA CGACCCTCAA 001760 001761 AATAGAATGG CATCACCGGC TCCTCCCTGG GTCTCCAGCT CCCAAACCCT CAAACTTCAA TTGACACACC AGATCCTCCC 001840 001841 CACAGTTAAA CAGCAGCACG GGCTGTTCCC CAAAGCTCCA GATCCATGAC CCTCTGACTT AAATGGCGGT AGCACCGGct 001920 001921 ccttcctagg tctgcagttc catgaccctc aaactacaca gcagcaccgg ctcctcccca ggtctacagc tccacCACCC 002000 002001 TCACACTAGA CACCAAGACT ACCTCCTCCC CACTCTCCAG CTACATGACC CTCAGACTTG AACAGCAGCG GCTCCTCCCT 002080 002081 GTACCTAAAG CCCCATTATG CTCAGACTTG AACAACAGCA ACACCAGCTC CCCCACAGGG CTCCAGCTCG AGGACCCACa 002160 002161 gatttaaaca gcagcaccgg ctcttcctgt gacctccagc tccactaacc tcaaactaga acagcagcat cggctcctcc 002240 002241 ttgggtctcc agcttcacta ccctcaggct agaacagcaa caccggttcc tccctgggtc tccagctcaa tgactctcag 002320 002321 atttgaaacg cagcaccggc tcctcacaaa gtttctggct ccaaggccct caaactataa tagcagcagc tgctgcaccc 002400 002401 tgggtctcca gctccacaac ccTCAAAGTA GAAAAGCAGC CCTGGCTCTT CCCCAGGTCT CCAGCTCCTC GAGTCTGAGG 002480 002481 Gttgtagagc tggagaccca gggaggagtc agtgctgctg ttctagtttg agggtcgtgg atctggagac ccagggtgga 002560 002561 gccggtgctg ctgttctagt gtgaaggtca tggagctgga agaccccgga aggatctgct gctgctgtcc tagtttgaag 002640 002641 gtcatggagc tggagaccca ggaaggagTC ATTTGAACAG CAGCACTGGC CCCTCCCCAG gtctactgct ccacCACCCT 002720 002721 CACACTAGAC ACCAACACTA CCTCCTCCCC GCTCTCCAGC TACACGACCC TCAGACTTGA ACAGCAGCAG TGGCTCCTCC 002800 002801 CTAGATTTCC AGCTCCATGA CCCTCAACCT GCAACCGCAG CACGAGCTCT TCCCTGTACC TCAAGCCCCA TGACCCTCTG 002880 002881 ACTTGAACAA CAGCAACACC AGCCACCCCC AGGTCTCCAG CTCCACAACC CTCAGCCTTA AGCAACAGCA GCACCAGctc 002960 002961 ctccctgggt ctccagattc acacccctca gattagaaca gcacccctcc tctctgagtc tccagctcca tgaccctcaa 003040 003041 actacaacag caacacgggc tcctccctgc atctccagct caacaaCTCT CAGACTTGAG AGGCGGCACC GGCAACTCCC 003120 003121 CAAGGCTCCG GCTCCATGAC CCTCAGATTT GAATAATGGT AGCACCATCT GCTATCCAGG TCTCCAGCTT CATGATCCTT 003200 003201 AAACTAGAAC AGCAGCACCA CTGCCTCCCT GGATTTCCAG CTCCACGACC CTAAGACATG AATGGCAGAA CTAGCTCCCC 003280 003281 ACCAGTTTTC CAGCTCCAGG ACCCACAGAT TTAAAGGACA GCACCAGctc ttcccgggat ctccagctcc actaccctca 003360 003361 aactagaaca gcagcactgg ctcctccctg ggtctccagc tcccaaacca tcaaactTCA ACTGACACAC AGGAACCTCC 003440 003441 CCACAGTTAA ACAGCAGCAC GGGCTGTTCC CCAAAACTCC AGATCCACAA CCTTCTGACT TAAATGGCAG TAGCACTGGc 003520 003521 tcctccctag gtctccagtt ccatgaccct caaactacac agcagtacca gctcctcccc aggtgtacag ctccacCACC 003600 003601 CTCACACTAG ACACCAAGAC TACCTCCTCC CCGCTCTCTA GCTACACGAC CCTCAGACTT GAACAGCAGC AGCGGATCCT 003680 003681 CCCTGTACCT CAAGCCCCAT GACCTCGGAT TTCAACAACA ACAACACCAG CTCCTGCCTA GGGCTCCAGC TCCAGGACCC 003760 003761 ACagatttaa acgacggcac cggctctccc caggatctcc agcgccacta cccttaaact agaacagcag caccgcctcc 003840 003841 tctctggttc ttcagttcca caacactcag gcatgaacag cagcaccggc tcttccttgg gtctccagct tcactaccct 003920 003921 cagactagaa cagcaacact tgttcctccc tggatctcca gctcaatgac tcccagactt gaaaggcagc accaactcct 004000 004001 ccatggatct ccagctccat gacactcaaa acaacatggc tcctccctgg gtctgcagct ccaggaccct cgaactacaa 004080 004081 caacattgtt cctccctggg tctgcggctc catgatcctc aaactcgaac aagacctctc ctccctgggt ctccagcttc 004160 004161 cggaccctca aattacaaca acattgctcc tgcctgggtc tgcagctcca cgaccctcaa ataagaacaa gacctctcct 004240 004241 ccctgggtct ccagcttcct gaccctcgaa ctacaacaac attgctcctg cctgggtctg tagctcgaca accctcaaac 004320 004321 tagaacaaga cctctcctcc ctgggtctcc agcttccgga ccctcgaatt acaacaacaa tgctcctgcc tgggtctgca 004400 004401 gctccattac cctcaaataa caacaagacc tctcctccct gggtcgccag cttccggact cgaactacaa cactgctcct 004480 004481 ccctggatct gtagctcgac gaCCCTTAGC TAGAacaaga cctcttttcc ctggtttgcc agcttccgga ccctcaaact 004560 004561 aaaacaacat tgctcctgcc tgggtctgca gctccacgac cctcaatctc aaacaagacc tctcctccct gcgtcgtcag 004640 004641 cttctggacc ctcaaattac aacaacattg ctcctgcctg ggtctgcagc tccatgaccc tcaaataaca acaagacctc 004720 004721 tcctccctgg gtcgccagct tcctgaccct tgaattacaa caacattgca cctgcctggg cctgtagctc gatgaccctc 004800 004801 gaactagaac aagaactctc ctccctgagt cgccagcttc ctgaccctcg aactacaaca gcattgctcc tccatgggtc 004880 004881 tgcagctcca caaccctgaa actagaacaa gacctctcct ccctgggtct gcagctccac caccctcacc ctagaacagc 004960 004961 agcaccagct ccttcctgga cctCCAGCTC AATGACTCTC AGACTTCAAA GGCAGCACCA GCTCCACCCC CAGGCTCCAG 005040 005041 CTCCAACACC CTCAGATTTG AGCAGCGACa acaccagctc ctttctgggt cttctgtttc acgatcctta aattagaaca 005120 005121 gcagcaccat cttctccctg ggtctccagc tccatgagac tcaagctaga atagcagcac cagctcctct tggatcttca 005200 005201 gctCCACGAC CCTAAGACAT CAGTGGTAGC ACCGGCTCCT CCCCTGGGCT CCAGCTCCAG GACCCTCAGA CTTGAACAAA 005280 005281 AACACCAGCT CCTCCCCAGG CCTCCAGCTC CTTGACCCTC ATAAACAATC CCTTCTTATG AAATGTAGCA GTCAGGAAAA 005360 005361 CTGTAGAGGA AG |
Predicted Small Protein
Name | NONHSAT120823_smProtein_2309:2530 |
Length | 74 |
Molecular weight | 7896.9945 |
Aromaticity | 0.041095890411 |
Instability index | 68.8684931507 |
Isoelectric point | 9.83697509766 |
Runs | 14 |
Runs residual | 0.0476358815731 |
Runs probability | 0.0395752895753 |
Amino acid sequence | MTLRFETQHRLLTKFLAPRPSNYNSSSCCTLGLQLHNPQSRKAALALPQVSSSSSLRVVE LETQGGVSAAVLV |
Secondary structure | LLEEEEHHHHHHHHHHLLLLLLLLLLLHHHLLLEELLLHHHHHHHHLLLLLLLLLLEEEE EEELLLEEEEEEL |
PRMN | - |
PiMo | - |