NONHSAT094668

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT094668

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2165 nt

Genomic location

chr4+:1135160..1137489

Exon number

2

Exons

1135160..1136211,1136377..1137489

Genome context

Sequence
000001 ACTTCATATT GTTAAAATGT CCGTACTACC CAATGCAATC TACCAAATCA ATGCAATCCC TATCAAAATT TCGATGGACA 000080
000081 GAAATAGAAA AACAATTCTA AAATTCATAT GGAACCAAAA AAGACTATGA AGAGCCAAAT TAATCTTGAG AGAGAACAAA 000160
000161 GTTGGAGTCA TCACACTTCC TGATTTCAAA ATCTATCACA AAGTCGTTTT TCCCTTTCCG TTCAGCATCT CTGAAGATGC 000240
000241 CATAGCTTCT GTTGAAACGT TAACAAAATC ATTTTTAAGA TTGAAGTAAC TGTGCCCTGA TATGATTGTG GTTTTCCCTT 000320
000321 TGGTTATTTT TAATTTTTTT CTGTTTGTAT TTGGCTTTCG ATAGTGTGAC AATGATGTAC CTAGGTGTGG TTGTCCTTAT 000400
000401 ATTTATCCTC ATTTGGGGTA CTCTGAGCTC CTTGAATCTC TGGGTTGATG TCTTCCATCA ATTTTCAAAA TTTTTTGGCC 000480
000481 ATTATGTCTT TAAATATTGC CTTTTCTCCA TTCTCTCTCA CCTTTCTCTT TGGGGCTGCA ATTGCATGTA TCTTAGGCCA 000560
000561 TTTGTCTTCC TCACATATCT TACACTCCTT TCTGGTCTTT TCATTCTTTT TTCTATTGAA ATCTCTTCCA GTTCACTAAT 000640
000641 CTAATCTCCT TCACTAATCT TCTTTCCTGG TCTTTTGTTG ACTCTATCGA ATGAGTTCTT CAGACATTGT GTTTTTCAGT 000720
000721 TCCAGAATGT CCACTTGGTT TTTTAAAAAG AGATCCTAAT TATTGAAATT CTCCATCTTT TCATATATCT TGTTCATCAA 000800
000801 TTTCCCTATT TTCTTTAACA TATTAATAGT AATTTTAAAG TCCCGCTCTG AATCATCTGT GTATCTCTTT CTATTGCCTG 000880
000881 TTTAATATTT TGGCTTCTGG TCATTCAATC TTTTTTTTTT TTTTTAAAGC ATGCCTCATA ATTTGGGATT GGATGCTGTA 000960
000961 CACCATAGAG GGTTTTTTTT ATTTTTTTGG TATATTGTAG AGGGTTTGAA TAATGCTATC CTCCTCCAAG GAGGGTTATT 001040
001041 TCCTGCTAGC AAGCCAGGTC CATGTGGCTG ACAAAACCTC TGCTTCATTC TTCAGCGGTT GCTGTTTCCT GCTGGTTGTT 001120
001121 TTTGTTTGCC TGTTTTGAGT CTCTCTCTGC TTTTATGTAA CTTAGGTATC AGCCAGTTAT TTGAGGAAGA TTTTAATTCA 001200
001201 GATTATTAGG CTCCTTATTT TTGTTTCCTT CCTTTTCTGG ATTTCCCTCC TCACTTCCCA GCCACTTTGG CAGTCCTGAA 001280
001281 CTCTGACCTC TCTTTCCTTG GCCCTTTCTC TTGAGATTTA TTACCCTAAT ATACAATTTG AAATTTTCCT GAGTGGAAAA 001360
001361 CACCAGGATG ATTGTGGAGC TCACCTCGTG TCTTTTCCCT CTCCAAAGAT CGTGGCCTCT TAAGTCCTGT CTGTGTTGGT 001440
001441 TGTACTCAAT GCCTTCAAAC AGGTGCTTTA GATGCCCATT GCTCTTGGAA TTCCCAGCCT TCAGAACTGT GAGAAATGTA 001520
001521 TTTCTTTTCT TTATAAATTA CACAGTCTGT GGCATTCTGA TATAGCAACA CAATATGGAT TGTGACAGAT GGCCAACAGG 001600
001601 CATCTCAGAT TTAATTAATC CAGAAAAAAA AATTCCTGAC CCCCCGCCCT CCCACCCTGA CCCAAACCAT GGTCTGCAGT 001680
001681 CTTCTCCATC TCTGTAAATT CTTGTTTATT TGTCTCTTTG TGAACCCCAT TTTCATTCTG TCAGAATGTC TTATAGGTTC 001760
001761 TGCCTTCCAA ATGCATCTGG TATCTGACCA TAGCTCCTCT CGCTGGAGCT CCCTTGATCC AAGCCCCATC CTCTTTCCTG 001840
001841 GATGATGGGA GGAGCTTCCC TGGATATCTC TGCTTCTGCA GCCATGTGGC ATTTAAAGTG TGGATTATAC TAAAAGCCTT 001920
001921 GTCACTCAGA GTCAAATTCA AAGTCTGTCT GTGGCTGTTG ACCAAGGTGC CGTGATGCTG ACCTTCCAGC CCCACCTTCT 002000
002001 ATCCTCCAGC CAGTCCAGCC TCACTGTCTG CTTCCTCAGA CACACTCCAA GTCTCCCCCA TCCCCGTGCA TCACAGCTTC 002080
002081 AGGGTTACTA TCCCAGTGAG TTCTTCTTCG TCCATGCTGG GAGCCTCCTG TCCCCCTCTC TGAGTTGTTT TATGACTTGC 002160
002161 TCATT
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Predicted Small Protein

Name NONHSAT094668_smProtein_371:643
Length 91
Molecular weight 10505.5491
Aromaticity 0.211111111111
Instability index 50.4711111111
Isoelectric point 7.75347900391
Runs 11
Runs residual 0.0176366843034
Runs probability 0.0460246342599
Amino acid sequence MMYLGVVVLIFILIWGTLSSLNLWVDVFHQFSKFFGHYVFKYCLFSILSHLSLWGCNCMY
LRPFVFLTYLTLLSGLFILFSIEISSSSLI
Secondary structure LEEELEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHLLLLL
LLHHHHHHHHHHHHHHEEEEEEEEELLLLL
PRMN LLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLH
HHHHHHHHHHHHHHHHHHHHHHLLLLLLLL
PiMo TTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTooooT
TTTTTTTTTTTTTTTTTTTTTTiiiiiiii