NONHSAT139213

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT139213

Source

NONCODE4.0

Same with

,

Classification

sense

Length

989 nt

Genomic location

chrX-:154006998..154009871

Exon number

2

Exons

154006998..154007628,154009514..154009871

Genome context

Sequence
000001 GGTAGGCATG GAAGGGCAGG GACAGATGGG CTCAGCCACA CAAGGGATGG CGAAGACAGT GCTCCTTGGG AATCTTCTGG 000080
000081 GGGCTCAGGA TTGCTTCAGC CTTTTAATGG GGTCAGCCTG GAACAAGAAC AGTAGTACTG GGAATGATGG AAAGTTGTAT 000160
000161 TGGGGTAAAG CTCAAAGCTG CTTATTAGAA GGAATCCATT ATGACAGCTA TGTAGGTTTT TTTTTTTCAC TTTCCTTTTC 000240
000241 TTCCTTCCCC CCCCTCCCCG CCGCCCTTCT TTTTTTTTTC TAGACCCTGA AAATTGTTCG GACAGCAGAA CTTTCGCCTT 000320
000321 TCATTGTGTT CATTGCACCT ACTGACCAGG GCACTCAGAC AGAAGCCCTG CAGCAGCTGC AGAAGGACTC TGAGGCCATC 000400
000401 CGCAGCCAGT ACGCTCACTA CTTTGACCTC TCACTGGTCA ATAATGGTGT TGATGAAACC CTTAAGAAAT TACAAGAAGC 000480
000481 CTTCGACCAA GCGTGCAGTT CTCCACAGTG GGTGCCTGTC TCCTGGGTTT ACTAAGCTTG TAGAATGGGG GAACCCACTG 000560
000561 TATGCCCCTC TCCAGCATTT GGAATTCCAC CCGCCTTGCT TTAAGACAAA CAGGGCTGCT CCAACTAGTT TTGTGTCAGC 000640
000641 TTCCAGCTCT CTGCAGCTAT CCTAATTCAG CCAGTAAGGT TCAGTCTTCT TGCTCAGGCT CCTGAAGGGT TGATTCTCCT 000720
000721 GATAGATGGG GCCCCACTGA TCTGGATTTG AAAAGGATTT CTAGAAATTG GGGGTAAGAA GTACTACCAA AATGTAACTG 000800
000801 CTAATCAAGG GTGATGCACA GCAAAAGCAA TGGACCCCAT CCCTCTAAAG CCTGCCCTCC TTTGCCTTCA ACTGTATATG 000880
000881 CTGGGTATTT CATTTGTCTT TTTATTTTGG AGAAAGCGTT TTTAACTGCA ACTTTCTATA ATGCCAAAAT GACACATCTG 000960
000961 TGCAATAGAA TGATGTCTGC TCTAGGGAA
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Predicted Small Protein

Name NONHSAT139213_smProtein_443:664
Length 74
Molecular weight 8113.4239
Aromaticity 0.0958904109589
Instability index 41.5095890411
Isoelectric point 10.030456543
Runs 13
Runs residual 0.0339372514361
Runs probability 0.0479121655592
Amino acid sequence MVLMKPLRNYKKPSTKRAVLHSGCLSPGFTKLVEWGNPLYAPLQHLEFHPPCFKTNRAAP
TSFVSASSSLQLS
Secondary structure LEELLLLLLLLLLLLLEEEELLLLLLLLLEEEEELLLLLLLLLHHHHLLLLLLLLLLLLL
LEEEELLLLEELL
PRMN -
PiMo -