NONHSAT140554

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT140554

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1076 nt

Genomic location

chr16+:11283169..11318739

Exon number

4

Exons

11283169..11283302,11290060..11290164,11290476..11290530,11317958..11318739

Genome context

Sequence
000001 ACAAAAAAAA CCGCCTGGCT GGATGTGGCT GGCAAGAAGA TGGCCGGAGC TGCAGGTGAC GAGTGATCAA GAGGAGCCCA 000080
000081 TGGCAGTGGG GACAGGTCAC AGCTGAAGTG GGTGACCTGC AACATGTTCA GCAGgtcact ttccctgggg gtagtcagct 000160
000161 gtcgtgtcac gaggacattc aaacagccct gtgggaagac ccatgtgaca aggagctgag gcctccagca aacagccaga 000240
000241 tgaagaccat gaggcacaga gaggtttgtt aacttgccca aggccaaaca gctggtgggg aagctgaggc ccagagaggt 000320
000321 gagtggcatg tccgaagcag cccagcgcag ggtgcgaggt aggcagggct gggcccccgg gccttccCTG TGAACCATCT 000400
000401 GCCCGCCGGT TGCAGGAGGC AGTTCCTGGA AAGCAAGCGG GCCGAGTTCC TCACAGAGAT CAGAAGAGCA ACAAGATCTC 000480
000481 CAGGCCAGGG CAGAGGTCCC CGCCCTGGAT GCTGGTGACA CTTCCCCTGG GCGGGAGGGG CTGGGAGCAT GCAGATCTCA 000560
000561 GCCCTGAACA GCCTGTCCTC TCGCCTCGAG GTTCTTGGTA GGCTGGGAAC AGCCTGTCCT GCTGAGCTTC CTGTCACCTC 000640
000641 TCTAGCTGCC CACACGCCGC ACAGCTGCCA CCGCCGGCCC TGGCCCGGGA GAGGGGGGTC TCTGGGGATC TTAGCAGGCC 000720
000721 ATGGTGGGGG TGTCTTGGGG CCAGCCTGAA CTGAAAGACC ATCACAGCTT GCAAGCCACC TCCCTGCTCT GTTGCTGGCT 000800
000801 CTCCTTGAAG ACAAGTGTTT TTCAATTAAC CAAAGCGGTG CATGGCAATG TGATAGGGGA ATGAAACACA GCAACAGAAT 000880
000881 CAATGCCCCA CGCTGGGCAA TAGCCGACTT TCTGTTCGCT CCCATCCCTT CCTTCCCTCC CCGCCTCCTT CCCCTGCTCC 000960
000961 Ttccattcca caaacattta ttgagcaccc gctgtgtgcc agccactgtt ctaggccctg aagacacaga agtgaacaaa 001040
001041 aaaaaagagt ccctgtgcac atcctggagg gacttt
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Predicted Small Protein

Name NONHSAT140554_smProtein_548:748
Length 67
Molecular weight 6647.5903
Aromaticity 0.0151515151515
Instability index 56.2121212121
Isoelectric point 10.2962036133
Runs 7
Runs residual 0.0445472690982
Runs probability 0.0338027102734
Amino acid sequence MQISALNSLSSRLEVLGRLGTACPAELPVTSLAAHTPHSCHRRPWPGRGGSLGILAGHGG
GVLGPA
Secondary structure LLEELLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLL
LLLLLL
PRMN -
PiMo -