NONHSAT011178

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT011178

Source

NONCODE4.0

Same with

,

Classification

sense

Length

560 nt

Genomic location

chr10+:5741456..5756170

Exon number

4

Exons

5741456..5741700,5754357..5754502,5754786..5754881,5756098..5756170

Genome context

Sequence
000001 gccgtatgaa ttatatctca acattgtatt agaaaataaa attaatgaag catagaagtt acggagaact actggaaaga 000080
000081 agaaatacaa gaactcaagg aagagacagc cagacaacag tagagtgtga aatgggaacc agcagaaaaa aagaaataga 000160
000161 gaaaaatgat caagccattt cagaagtaca caagggagac tagacaccat ggcaaagatc ataaaagtag aaatgaaaTT 000240
000241 TTATGTTTTT GAGACAGTGT CCTTGAGTTC AGACTCTCTC TTCCAGAGGG CAGTTTCACT CCTCCATACT TCTTACTTGG 000320
000321 ACTCTTCATC TGAGCATGGT TTTCAGTACA GTCAAGTGAC TTTGGTGAAA AATGACATTT TCTTAAATGA GTACAAAACT 000400
000401 TTTTACCAAC AAAAAAAAGC AAGTAGTTAT ACTCAGGAAG AACTTCAAGA CACTTACGGG TTTCTTCTGT TTGATACTGA 000480
000481 AAAGCAGGCA AAATTGGTAT GTCAGTGTGG ACTCCGTGTT GGCAGCAGTG CTGTTACCAC TCTGGGTGAT CCAGCCAAAG 000560
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Predicted Small Protein

Name NONHSAT011178_smProtein_44:202
Length 53
Molecular weight 6064.6349
Aromaticity 0.0192307692308
Instability index 62.1884615385
Isoelectric point 7.93157958984
Runs 10
Runs residual 0.041938287701
Runs probability 0.0389595477831
Amino acid sequence MKHRSYGELLERRNTRTQGRDSQTTVECEMGTSRKKEIEKNDQAISEVHKGD
Secondary structure LLLLLHHHHHHLLLLLLLLLLLLLEEEEEELLLLHHHEELLLLLLEEEELLL
PRMN -
PiMo -