NONHSAT074905

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT074905

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2159 nt

Genomic location

chr2+:150445613..150455210

Exon number

6

Exons

150445613..150445771,150450248..150450573,150450739..150450970,150450977..150450990,150451621..150452446,150454603..150455210

Genome context

Sequence
000001 AATCAGCTGC TTCCCCAAAA AGCCAAGGGT ACTTTTAATG GAAAATGATA TTAGAAATCA AGATTTGGAC ATTTGGGATG 000080
000081 TTGTTGCTTC TAGACACTCT CAGCTGACAG AGCAAGGAAA TATTTGTGGA TATGCTAACC TGACTAAATA CGCATATCTG 000160
000161 CTCCATACCT ACCTAACATC TATCTTCTCA AGAACTCTGC CAGGGAAGGA GTAGTTTCTG TGTTTCATAA ACAGACTGAG 000240
000241 ACTCAAAGAG GCTAAGTAAA CTACCTGAAG CCATATATAG CAACACACAA TGACGGATGT GAGATTCAAA CTTGGATTTA 000320
000321 TCTGGCTCCA AAATTTCTAG TTTTTTTTTT TTTTTTTTTC CCACTACAGC AAAACTAAGG AGAAGAGACA GAGGTGAATA 000400
000401 GCTGTCTCTC AGTGGTTATT CTGTTTTCCC TTATCTACAT GTTTTCCTCC TTTCACTCTC TCTTGGTTTG TTCTTATCCT 000480
000481 TCAGAAAAAC ACTAGATCTG AATAACAAAG GATGCATACT TAAGCAAACT AAGGCATATA TAGTTATCAC TAAATGCTCA 000560
000561 ACCTGGAAAG AATACTGGAT TGCAGTCTGC TTTTTCTGTA AAGACAATAG TATTATAAAA CCGAAAGAGA CAACAGGGAA 000640
000641 TATTTCCCAC TCAACTAAGC ATATCTAAAA GCACATTTGA AGTTTGGAGA CAATATTCTG TGTTATTTTA AGAAAAGTAG 000720
000721 CATTATTACC TTCTGTGGTG ATCTAGCTAC ATAAGAACTG GAAATGCCTA GGTTTAAAAT CGGGGTATAA AGCAACCCAG 000800
000801 AGCTTGTTAG ATATGCAAGA TCTCTGGCCC TATCCCCAAA CTACTGTCCC AGAATATGTA TTTTAACAAG GTTGCTAGTG 000880
000881 ACTCATATGC TCAATAATGT TTGAAAAGCC CTGCCCCAGA CTCTTGAATA GGATTGGCCA GGAGGTGGGA AAAGGGATGG 000960
000961 TAGCAGTGGT GCTTGCAATG TACATAGCCC CAGATATATA GAATCAGAAT CTGTAAGAGT GGAGACTTAG GAATCTATGT 001040
001041 TTTAACAAGC TCCTCAGGGA ATTTTTATAA ACACTGCAAT TTGAAGATCA CAGGTAAGAA ATAAAAACAG TTCAGGGGAG 001120
001121 AAGTGCAATA TACACTATGA ACACCAGCTG TCAGTACTCT ACAATTTAAA AATGACCTTG ATGGTTAATA GTGAAAAGAA 001200
001201 TTATTACAAG AACATTTTCT AAATTTGAAA TGTAAAGATC TAGGGAACAT GAGCTCTAAG TTAAACAGAT TTGAATTATC 001280
001281 CTGTGATTTT ATCAAAGATC TCTAGACATA TAAATAGTTT ACAGAGAGTA GTGGTTGGAG ATTTAGAGAT TTTGGGTACA 001360
001361 TGTGAGTAAG TCCATGTCAG AATAATGTCT TACTATACTT GGGAAAATAA AGTGAATGCT TTTGTGGTTT TAAAACCAAA 001440
001441 CTGGACTCTA CAGTTTGAAA GTATGTAAGG CAGGTCAATG ACTCTTTCTA AGAAATCTTT TCATTTTCTT GGCATTATGT 001520
001521 CCGTTACTGG GTTTTTCAGG ACTTAATTTT CTAGAGGGAC CCCGCAGGGC AGAGCGACGT TGCACTGAGG CGATCTGAGC 001600
001601 TGAGCACAGG GGTAAGGATA TATTCCTGGA CTGTGTGCTG CTGTCACCGA GAACATTTGC AAATCTGCTG ACACATTACA 001680
001681 GTGGGAATAT CCCCTGGACG CATGGAAGGC CCAGTGCCCT GTCATTTGAG CAGTGCAGGC ACGTCACCAG CCCATGGGGA 001760
001761 TGTCAGTATT CATGCTGCTC TTTGATATAA AGTTCGCATT TTCTATATGG TTTGATGATG TTTAGTGGGA TCAGTGATGC 001840
001841 CTGTTTGTTA ATTGCTTACA GAAGATTTGG GCTTAAAAAT AAAATCTTGG ATCAGGTAAC ATTCTCTGTT TTAAATTTTA 001920
001921 TTGATATTTC TGAATTCCAA GGAAATTACT TACATATCAG ATGGTCTTTG AAACCTTATT TTTTTCTATT ATTTTTAGTA 002000
002001 TTCTCTGCAC TCTGTCTTAT ATTTCTGCCC TTTCTCCTGC ATAAGTAAAA CAGAAAGATT TAGTTAGCGT TTGAGGATGA 002080
002081 AAATTATCAA GCCTATATTC TCAACAACAA TCTGGGATTT GAGTTAATTT TAATGTCCAA TTTGTGTCCC TCTTGCCCC
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Predicted Small Protein

Name NONHSAT074905_smProtein_1814:2047
Length 78
Molecular weight 9098.8476
Aromaticity 0.194805194805
Instability index 45.825974026
Isoelectric point 9.13848876953
Runs 11
Runs residual 0.00677583286279
Runs probability 0.0520226108462
Amino acid sequence MMFSGISDACLLIAYRRFGLKNKILDQVTFSVLNFIDISEFQGNYLHIRWSLKPYFFLLF
LVFSALCLIFLPFLLHK
Secondary structure LLLLLHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHEEHHHHHLLHHHHHHHLLHHHHHHH
HHHHHHHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHH
HHHHHHHHHHHHHLLLL
PiMo oooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTT
TTTTTTTTTTTTToooo