LINC01021
Revision as of 13:59, 23 June 2016 by Chunlei Yu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== LINC01021 ===Approved Name=== long intergenic non-protein coding RNA 1021 ===Previous Symbols=== _ ===Synonyms=== _ ===Chromoso...")
Contents
Annotated Information
Approved Symbol
LINC01021
Approved Name
long intergenic non-protein coding RNA 1021
Previous Symbols
_
Synonyms
_
Chromosome
5p14.1
RefSeq ID
NR_038848
OMIM ID
_
Ensembl ID
ENSG00000250337
pubmed IDs
26183718
Sequence
>gi|336391099|ref|NR_038848.1| Homo sapiens long intergenic non-protein coding RNA 1021 (LINC01021), long non-coding RNA
000001 CTGGGAATCA ATGTGTGAGG TGGTGCTATG TAGCAGGAAC CCCTCTTGCT TTGCAAATAG TTTTTTGTTT GTTTTCCTTT 000080
000081 TTGCCCAATA GAGCCCTGCT CTACTGACCC TTCAATGTGC CCGTGTGCCT AAATATTCCT GGTCGTGTGA AAAGAACCCA 000160
000161 GGTATTAGCT GAACTAAGGA GCACAATTCT GCAACATTTT GGCACCCAAA CACGGGGCTT GAGAAATGAA TGCAATTGGA 000240
000241 GAAACTGGTT GTTTTACCAG GCGTTGATTG GAAATGTGTG CTTCCCTTTA AGCAGTCAAG CTCAACTTGC AGAACTGATG 000320
000321 GGAACCCCTT GGGAAAACTG GCCTCAAATG TTTGTCTACA CAGTCCACAT ACAGGGTTCT TAACCTGCGA TGAGGGAAAC 000400
000401 TTCCCAGGGC TTGTCTGGGT ATGCCCACAG TGGACTGGAG CCCAAAATGC ACACTGGAGG AAGTGGATGG AGCCACGTGG 000480
000481 ATGTCATGCC TTATGCAGGG GAGGAGCCTG CTCTCTTCAG CTCCTGTGGT AATGTGGGAA TCGATCTGTG AGCATATTTA 000560
000561 ACTATCCGGC TATTTTGGAG ATTGAAAAAA GAAGACCTGA TTTATCATGT GCAATATCTC ACACATCTGT CATTTCTATT 000640
000641 CTACCGCAAT TCGATGGAGT CTTGTTCTGT GGTCCAGGCT AGAGGGCAGT GGCATGATCT CGGCTCACTA CAAGCTCTGC 000720
000721 CTCCCGGGTT CACGCCATTC TCCTGCCTCA GCCTCCTGAG TAGCTGGGAC TACAGGCGCC CGCCACCACG CCTGGCTAAT 000800
000801 TTTTTGTATA TTTACTAGAG ATGGCTAGTG TTAGCCAAGA TGGTCTCGAT CTCCTGACCT CGTGATCTGC CCACCTCAGC 000880
000881 CTGCCAAAGT GCTGGGATTA CTGGCGTGAG CCACCGTGCC TGGCCAGCAT CCTCTAATTA TTATTCATAG TTTGTGAATT 000960
000961 TAGGCCTACG TGAATAATAA TATAATATTT ACTATGATGT TACTATCTAC CAACCTTATT TTTCTTTTCT ATAAAATAGG 001040
001041 AGCCAAAATA ATATTTATGT CATACCTTAT GAAGTTAAAA TAAAATATAA CGAATGAGGG GCTTAAAAAA AAAAAAAAAA 001120
000081 TTGCCCAATA GAGCCCTGCT CTACTGACCC TTCAATGTGC CCGTGTGCCT AAATATTCCT GGTCGTGTGA AAAGAACCCA 000160
000161 GGTATTAGCT GAACTAAGGA GCACAATTCT GCAACATTTT GGCACCCAAA CACGGGGCTT GAGAAATGAA TGCAATTGGA 000240
000241 GAAACTGGTT GTTTTACCAG GCGTTGATTG GAAATGTGTG CTTCCCTTTA AGCAGTCAAG CTCAACTTGC AGAACTGATG 000320
000321 GGAACCCCTT GGGAAAACTG GCCTCAAATG TTTGTCTACA CAGTCCACAT ACAGGGTTCT TAACCTGCGA TGAGGGAAAC 000400
000401 TTCCCAGGGC TTGTCTGGGT ATGCCCACAG TGGACTGGAG CCCAAAATGC ACACTGGAGG AAGTGGATGG AGCCACGTGG 000480
000481 ATGTCATGCC TTATGCAGGG GAGGAGCCTG CTCTCTTCAG CTCCTGTGGT AATGTGGGAA TCGATCTGTG AGCATATTTA 000560
000561 ACTATCCGGC TATTTTGGAG ATTGAAAAAA GAAGACCTGA TTTATCATGT GCAATATCTC ACACATCTGT CATTTCTATT 000640
000641 CTACCGCAAT TCGATGGAGT CTTGTTCTGT GGTCCAGGCT AGAGGGCAGT GGCATGATCT CGGCTCACTA CAAGCTCTGC 000720
000721 CTCCCGGGTT CACGCCATTC TCCTGCCTCA GCCTCCTGAG TAGCTGGGAC TACAGGCGCC CGCCACCACG CCTGGCTAAT 000800
000801 TTTTTGTATA TTTACTAGAG ATGGCTAGTG TTAGCCAAGA TGGTCTCGAT CTCCTGACCT CGTGATCTGC CCACCTCAGC 000880
000881 CTGCCAAAGT GCTGGGATTA CTGGCGTGAG CCACCGTGCC TGGCCAGCAT CCTCTAATTA TTATTCATAG TTTGTGAATT 000960
000961 TAGGCCTACG TGAATAATAA TATAATATTT ACTATGATGT TACTATCTAC CAACCTTATT TTTCTTTTCT ATAAAATAGG 001040
001041 AGCCAAAATA ATATTTATGT CATACCTTAT GAAGTTAAAA TAAAATATAA CGAATGAGGG GCTTAAAAAA AAAAAAAAAA 001120
Predicted Small Protein
| Name | LINC01021_smProtein_653:817 |
| Length | 54 |
| Molecular weight | 6173.0232 |
| Aromaticity | 0.148148148148 |
| Instability index | 66.1351851852 |
| Isoelectric point | 7.82427978516 |
| Runs | 11 |
| Runs residual | 0.0410117434508 |
| Runs probability | 0.0251240545358 |
| Amino acid sequence | MESCSVVQARGQWHDLGSLQALPPGFTPFSCLSLLSSWDYRRPPPRLANFLYIY |
| Secondary structure | LLEEEEEELLLEEELLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLHHHLEEEEL |
| PRMN | - |
| PiMo | - |
