NONHSAT089783
Revision as of 19:25, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089783 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1386 nt |
Genomic location |
chr3-:50137036..50138421 |
Exon number |
1 |
Exons |
50137036..50138421 |
Genome context |
|
Sequence |
000001 AAATGCCGCC ACAGACTTTC ACTATGTTCT CTTCACTGTC AAATGGAGAG TTTGATATAC TAAGCTTACT CTCAATGGAC 000080
000081 ATAATAGGAA TATAACAAAC TAGAAAAAAG GGAAACATTA AGATGTTTTA GTGATTACCA GACAGGTATT CAGTAGTTAA 000160 000161 CAAAGCCCTG CCAGGTAGGT AGCCATGTTT AAAGGCAGAA CAAATTCTAT AATGAAGTCC TTGGTACTGT ACTTATTCTA 000240 000241 GTAACATCAA TTTTAATATA TACAAAGCTT TTTTTTTAAA AAAAAGTCAC TCCTTTGGAA CAAACCACTC CTTCAACCTT 000320 000321 TTTTTAAAAT TGTACAGACT TGTTCCATTT TCATGAATAT CTAGACTTGG TGAGTGAAGC AACCTGATTG GCTTCCATCC 000400 000401 AGCTGGTAGC ATCTTGCAAG TGATAAAACT CCACGAAGGC GAAACCACGG CTTACACCTA GAGACAGCAT TCAGATATAG 000480 000481 ACGGGATACT TGTGTTAGTC AGTTCCTTTA TAACAGGTGA ATCTCTCTCC CACTGCTTCA ACACTGCGTG ACAAAGCCAA 000560 000561 TTGGGAAGCA GCTTTACAAA TGTGACTTGA CTTGGGGATC TTCTTGATAC TTTGCCATGG CAAGGAACAA GCCGCCTGAA 000640 000641 CTAAATGCCA CTCCATTTGA TTCCACGCTT AAAGTAACCA TGCAACCGAC TATAGTCAAA AAAAAAAAGG AGTTTATAAA 000720 000721 TCATTACTTA CCTAAGGAAA AAAAAGTCCC TAAAACAAAG TTTAAAAAAG TTCCTCAGAT GCTAACATGG TTTTCAAAGA 000800 000801 GTCACATTCC TTAGCCATGG CAAACCTTTC ATTCTGAATT CATGTGCTTG AAGACTGGGG GAATCAGGAT GTTCTTTAGG 000880 000881 GACTGAGGTG GGAATGGGGA AGAGAACAAT AATATCAGGA ACTAAGCAAG CTCTCACCTG TTTTCCTCTT CATCAGCCTC 000960 000961 ACATCCGCAG GCTGAGGGCC TTCGAAGGAC TCCATCATTT CTCGAATCTG CACAGGGTTT TACATTATTT ACAGTTAAAG 001040 001041 CTTTTGCCAC ACACTATTCC CCATGGAATA GGAATTACAT CAACTGTTTA ATTAGCCAAG TTTTTTTTTT TTTTAAGATG 001120 001121 GGAGTCTCTG TCTCTCACTC ACTTGATTGC CCAGGCTGGA GTGCAGTGGC ATGATCTCAG CTCACTGCAA CCACCACCTC 001200 001201 CTGGGTTCAA GCAATTCTCC TGCCTCAGCC TCCCGAGTAG CTGGGATTAT AGGTGTGCAC CACCATGCGT GACTGATTTT 001280 001281 TTTTTTTTTT TGAGACGGAG TCTCGCTCTG TCACCCAGGC TGGAGTACAG TGACGTGATC TCGGCTCACT TCAACCTCCA 001360 001361 CCTCCTGGAT TCAAGCGATT CTTCTG |
Predicted Small Protein
Name | NONHSAT089783_smProtein_893:1090 |
Length | 66 |
Molecular weight | 7439.7248 |
Aromaticity | 0.0615384615385 |
Instability index | 45.0676923077 |
Isoelectric point | 11.467956543 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.033710180769 |
Amino acid sequence | MGKRTIISGTKQALTCFPLHQPHIRRLRAFEGLHHFSNLHRVLHYLQLKLLPHTIPHGIG ITSTV |
Secondary structure | LLLEEEELLLLLLLLLLLLLLHHHHHHHHHHLLLHHHHHHHHHHHHHHHHLLLLLLLLLE EEELL |
PRMN | - |
PiMo | - |