NONHSAT106021

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT106021

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2780 nt

Genomic location

chr6-:350248..354323

Exon number

2

Exons

350248..352633,353930..354323

Genome context

Sequence
000001 ACCAAGGTCC CAGAGAGCAG GCGGGGCACT GGGCCCTCAC TCCCCAATAT GCAATCAGTC ACCAAGAATA GTTGCATGTC 000080
000081 CTTCCCCACC CTCCATCAAG TCCATTTGCC TGCTGGGCCC CTCTTCATCT CCACCACCAT GACCCGTGGC AGGCTGCTGT 000160
000161 TTTTTCTCAC CGGCATAGTC CTAGCAGCAG CCTCCTGACT GGCCCCAACA TGCAGTCCCA CCCCACTTGG GCACCTGCGT 000240
000241 GAGCCTTCTG CCTGCACATC CATCATGCGT CCCGCTGGCT CAGCACCCTT CAGCAAGTCC TCCACTCCCC CACCATCTGC 000320
000321 AGAATTGCAG CCGCACCACT TACAAGGTTA CAAGCTCAGG AGTCAGACCT CTGAGAACAT GGTAAGGTGC TGCCTGGGCC 000400
000401 GGAGCCCATG AGTGACTCTG CTGAGCTCCT CCCAGCTGCT TTCGCCAGCC ACAGCTGGCA GCCCCTTGTG CCCTCACTCC 000480
000481 TTCCCTCCCT GCCCACTGAT TTGGGACCAA AAGATCCAGC AGGTTCCAGT CCCAGCAATG TGGACATCTT CAGGCGCATT 000560
000561 CCGAGGTGCA TTTCACAGCC CCTCTGAGCC TCGAATGAGT GAAATACCTT CTCTGTCAGT TTAAAAAGCT TAGGGGCAAC 000640
000641 AGTTCGGGAC CTGCAGAGCA GCACGCAATT ATGAGATGAT GGGTGTTGGT GTCAGATATA AGCCTGCAGT AAGACATGGT 000720
000721 AGTGGGGAGT GACATTGGCT GAGAGCTGGG TGACCCTGCA GACTGGGGCT GTTGCATGAA AACCTGTTTT CCTGCTGTGG 000800
000801 CTACTGCCTC ACACCCCAGG AGACACACAC AAGTCTTCCT GGGCTGTGCT GGGGCCTGGC TGCTGCCTCC TGAGTGGGCC 000880
000881 CCACAGGAGA CACAACCAGG GCTTGCTGGT CTGGCCCATG AAAACACTCA GAGGCACCGA GGACAGAGCC ACCTGTGCCA 000960
000961 TACCAGGCAT TCAGAGTGTC CCCTCACGCT CATCGGACTG CTGCAGAGGC TAGAAGCTCA GGAGTCAGAC CTCTGGGGAC 001040
001041 CTGGCAAGGT GCCTTACCTC CCTATGCCTC TCCTGTGGCC CCCAGCCACT CCCCTGAGCT GCTGCCGGGA GCTTCAAGGC 001120
001121 ATCAGAATCT ACATAAAGTC TGCCACCTAC AGTCAACCAG CTCATGAGTT CACTTGCCTT TAGATCAACC CAAACTTACC 001200
001201 CTAGCAGCGT TAAATTTCCC TTTTCCTCCA CCAGATCAGA GAAGGAAAAT TTTACAAATT GACTTAAATT TCTCGTCAAT 001280
001281 TCAGGTGACG TTCCCTCAGA TTAAAAGCTG AAGATGGAAT GAGAGTAGCT GTGTTCAATG CTGTGCGGCA GATGCACACG 001360
001361 GCGCGGCTGG CTGCATGCTC CTGGGCAAAC ACAACTCGTT CCAGGTGCCG AATACGCCGC TCCCACCGTG CAGGCAAAAC 001440
001441 AGAACTAACT CTCATGTCCA CATTTCCTTC GCCTCACACT CATGGCCTAT TTTTCTTTCT TGGAGACATG AATTCACCTT 001520
001521 TTGTAGCATC TGCTATAGCG CCTTCTGGAG GCAAACAATA GCCTCTAAAA TAAAACCAGG AGTAGGCTTC AGTCTTGCCT 001600
001601 TGGAATCCCT CACAGGCAGA AGGGCGCGTG GTGACTGCCC CTTGGCTAGG GAAGAATGCA TCGCACGCGA CCTTAAACTT 001680
001681 GGCTAAGTTG CCCTTTATTA ACGAAAACAT AGAGCTTTCG GTCAATTCCA CCACGGAGAA CACAAACCAG AGATAAAACC 001760
001761 CACACCAAGG GCTATTTCCC AAGCTGGGGA ATTTGAGAAC ACACGGGCAG AGTTCACGCC ACACAACTAC ACTGGGCTCG 001840
001841 TCCTTGGGAG GCGTTCACAG GAAGCAATCA CGAGCGCCAA GCCACCCACA AGGCAGTGCG GCAAGGCTCC CGGGATCCTT 001920
001921 ACAGGCATCC AAGCGAGGTA CAGAAACCTC CACAGCAGTG GGGATAAGGG GAAAATATTT TCTCTTGCTA AAGAATATCC 002000
002001 TTAGTTCTCA ACATAAACAT GACTACGTAT ATATTCAGCT TCAAATGAAA AACAAGTTTA CAAATCACTA CTGGATACTT 002080
002081 AAACTCTATG TTGCTTTTCT TTTTGGCAGC ACCAGCCTAA ACTCTGTGGG TTTGCAATAT TTCAGAAACT TCAGGTACAT 002160
002161 TACAGTCTTC TGAGAAAGGC CCAGAACTTC AGAATTCCCG GAGCGGCTGT GAAGAAAGAA CATTACTGGC AACAAATATT 002240
002241 AAAACAACAT TTCAAGAACT CCAAGAATAC ACTGAGAGGT TTGTAAAGGT GCACATATTT AAGCATTCAA GCTATATCCT 002320
002321 AAATCATTTT TCTGTTAACG TATTTATTTT TGGCTTAGGA AAAACATGTA CTTTATTGGC AAATTGTTTT AGCTGTAGAC 002400
002401 GGATGGATGA TTCTACAGCC ACACTCCCCT TTCCGGGTGT ACATCCGGGG CCTGTGCACC TGCGCGGAAT CAGGCAACTT 002480
002481 TGTTTTTCCC GGTCCCCAAA AAGCTCACCT TTGACACACC CTCTATATGC ACAGGAAAAC TGCTCTTCTT ATTCAGGGTC 002560
002561 TCTTTTTGTG GTGGAATTCA GAGAAACTGG GTTGCAACAT CTTTTTAGGG AGAGGTCGAG TATGTTTTTT CATTCGAGTG 002640
002641 ACTCTGCATG CTTAAGGAAT CTGAGTCGGT ATAAAGGACT AGACCACTGA ATTGCGTACA GCGTCCCAGG ATGCCTGCAG 002720
002721 CCCCAGAGTA CAAACTGTAG ATGCTCTCGT GGCCTGAATG TGGAATTTTA CCCACCAGAA
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Predicted Small Protein

Name NONHSAT106021_smProtein_2402:2689
Length 96
Molecular weight 10727.9748
Aromaticity 0.105263157895
Instability index 69.4315789474
Isoelectric point 8.59503173828
Runs 11
Runs residual 0.0132615002072
Runs probability 0.0466107819049
Amino acid sequence MDDSTATLPFPGVHPGPVHLRGIRQLCFSRSPKSSPLTHPLYAQENCSSYSGSLFVVEFR
ETGLQHLFRERSSMFFHSSDSACLRNLSRYKGLDH
Secondary structure LLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLEEEEEEL
LLLHHHHHHLLLLEEEELLLHHHHHHHHHHLLLLL
PRMN -
PiMo -