NONHSAT094310

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT094310

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

677 nt

Genomic location

chr3+:195960018..195967751

Exon number

2

Exons

195960018..195960434,195967492..195967751

Genome context

Sequence
000001 TTGGGTATGA AACTTTCTCT TCTCCAGACC TGGACTTGAA CCTCAAAGCC TAAGGTGGAT GGCTTGGACA ATGAAAGGAT 000080
000081 GCTGTACTCA TTAGAATACA AGATTCCTTT ACTGTCCCTC AACCTTGACC AAATGGGAAG CATTCCCCCT TGTCAACACA 000160
000161 AGCTGGCAGA TACATTTGAC TCTACAGATG AAGGTGAACA ATGTTAGAAT AAAATTGCTT TGGATCTTGC CTGGAAGGTG 000240
000241 TTTTAAGTTT TGTAATAAAC AAGATGATGT CTGAAAATGT GTAACTGGGC ACCTTGCCTC TGTCCATGTC ACTATTAACC 000320
000321 CTTCAAGGTT GTATATTGCT Ggctaggtgc gacagctcat gcctgctatc ccagcacttt gggagcctga ggcgggagga 000400
000401 tcacttgagc ccaggaggtc aaggctgcag taagccaaga ttgcgccact gtactctggc ctggatgact gagtgtgact 000480
000481 ctatctcaaa aaaagaaaaa gaaaaGTACT CTCAAAATTT CCAGATCATA AAGAGAAAAG GGATTATGTT TAGAATTTTT 000560
000561 AAACACCTGA TTTTTATGGG AAAAATAAAG CTATAGTAAG TAAATTAACA AGAGCTAGGG TTTATCTGCC TAGATAAATC 000640
000641 ATATTTAGAT GTAATCATTT TATCCATTCT TATAGCA
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Predicted Small Protein

Name NONHSAT094310_smProtein_305:595
Length 97
Molecular weight 11073.0953
Aromaticity 0.0729166666667
Instability index 62.74375
Isoelectric point 9.73834228516
Runs 13
Runs residual 0.00118127147766
Runs probability 0.0419673066732
Amino acid sequence MSLLTLQGCILLARCDSSCLLSQHFGSLRREDHLSPGGQGCSKPRLRHCTLAWMTECDSI
SKKEKEKYSQNFQIIKRKGIMFRIFKHLIFMGKIKL
Secondary structure LLLLLLLLEEEEEELLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLL
LHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHLEEEL
PRMN -
PiMo -