ENST00000419624.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000419624.1

Source

Gencode19

Same with

lnc-CD177-1:1,NONHSAT066583

Classification

intergenic

Length

500 nt

Genomic location

chr19+:43657431..43665014

Exon number

3

Exons

43657431..43657763,43659324..43659477,43665002..43665014

Genome context

Sequence
000001 AAAGGAGGAT GTTGCTGATC TCAGTACAAG CAATGTTAGA GAAAGGGGAA GATGGAAGTG GACGAGGACC AGTGAGTGGA 000080
000081 AGGTGACAAA TGGAAGCAAA GAAACCCATC CAGACCATTG AAGATGCTTG AGCGAGAAGA AAGAGGCGGT GGAGGGAATG 000160
000161 GAAGCCCGAG GAAGTCATTT GTTGCAATAG GATGCCTCAG AGCACGTGTA GGGTGCGGGG CAGAGCCCAT GCAGAGGGGC 000240
000241 TGTGGAAGGC TGGCAGGGTG CAGGTGGCCC CACTCTCCGT CACCCTGAGG AATATGTGGT CAGAGTTAAA GCTCAGTCTG 000320
000321 TTTCTGGGAT CAGTATTTTG TCATGGCAGC CCTAGCAAAC TACTACAGGG ACTGTGAGGG TTAAGATGAC ACCAAACATC 000400
000401 AAATGCCACT CCCTGTTCCA ACACTGAGAC CATTCCACAG CCTCTGAATG ACAAGACAGG CCTTCAAAAT CAAGACCACC 000480
000481 TGGCTAGATT CTGGATATTA
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Predicted Small Protein

Name ENST00000419624.1_smProtein_191:376
Length 62
Molecular weight 6706.8476
Aromaticity 0.0655737704918
Instability index 52.5393442623
Isoelectric point 10.8950805664
Runs 12
Runs residual 0.0439042773695
Runs probability 0.0349099099099
Amino acid sequence MPQSTCRVRGRAHAEGLWKAGRVQVAPLSVTLRNMWSELKLSLFLGSVFCHGSPSKLLQG
L
Secondary structure LLLLLLLLLLHHHHHHHHHLLLEEELLLEEEHHHHHHHHHHHHHLLLEEELLLHHHHHLL
L
PRMN -
PiMo -