ENST00000535639.1
Revision as of 17:16, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000535639.1 |
Source |
Gencode19 |
Same with |
lnc-VAMP1-1:3,NONHSAT026070 |
Classification |
intergenic |
Length |
2364 nt |
Genomic location |
chr12-:6548167..6560683 |
Exon number |
6 |
Exons |
6548167..6548842,6552712..6552883,6556127..6556253,6557203..6557316,6557806..6557903,6559507..6560683 |
Genome context |
|
Sequence |
000001 ACAGGAAAGG GCCCTGACAA GAGGATGGGA CTGCAGTTGT GGCTGCCAGG TCTCACTCTC CCTTGGATGG TCGGCGGGGT 000080
000081 GGGGGTGGAG GCCAGGGCTG TAGTGCAGCT CCCGCAGGTG CTGGCTCAGG GGGAGCAGGC AGGCTCCGGT TTTCGGTAAT 000160 000161 CCTCCTGGAT GGGGATGGTG CTGCCCTCCT CCTCCCTGGG GCAGCTGTAA TGACAAGGCT CTGCAGGCTC CACAGGACTT 000240 000241 TCTCCTTTGT CTGCAGAAGG AGATCCGATG AGTCTTGGCC AGCAGTGGGG GCAGGGGGAG ACGGGAGAAG GAGATGGGTA 000320 000321 GAGGCGGGTG CGCTTGGGGG AGGGGTGTCA GGAGCACGCC AGCTAAGGGG AGAGAAGGGG TAGGACCAAG GCTGGTGAAG 000400 000401 TGGAGCTGGT GGGTTTCAGT GAGATTCCAG GCGTGGGCAG TGGGGTTGAG CCAGTGGGGT GTGGTGCAGG GGCAGGACCG 000480 000481 GAGGCCTGTG TTCTGTCTCT TACTTGATCT ATATTTCCTT CGTTGATGGA GGAACAGGGC CCCGGCCAGG GTGAAAACAA 000560 000561 GGAACATTCC AGAGAAGATC ACAAGGATGC GAATAAAATC GGAGCTGCAC AGGGATCTTT GGGCTGTAAT AGGAGGGGAC 000640 000641 ACACAGGGGT TAGGGGAGGG TCTAGCCCTT GGCTCCCTCA GCCCAGCCCT CCTGTCACCT TGCCTCTCCC CTTTCCCCCA 000720 000721 CCTTATTCTA TCCCACCCGC CACCGTTGGC CAACTCCTCT CCTAAACAGT GGACTCTGCT TTTTCCCCTC CTCTTATCCC 000800 000801 TAATCCTAGG AGCTTTCTGT CTGGCTTCCC TCCTGGCCCC TCGTGTATGC ATTCTCTCTA GCGGTGGGGA TTAAGGAGAA 000880 000881 AACTCACGTG GCCAGTGGGT AGAGAGAGTC CGGGCAGGCA GCTGCCTGAA GTCAGCCAGA GTCTGCATGT GCCCAGCTGT 000960 000961 CCTGGCCTCC AGCATCTCTG GAAAAACAGA GACAGAATGA GTAGCAGCAG GGGACCCCAT AGGGCACATC TGAAGGCCTG 001040 001041 AGAGGTGCTG GATGGGATGG GAAGGCAGAA ACAGGCTGAC CTTATCTAGG GGTAGGAGTG GGGAGTACTG GTTGGGGTAT 001120 001121 CACCGCTACC CCACGTGATG GCACAGAGAG TTGCCTGGAA CTTACCACTG ACATAAGGTT GGAGTGCAGT GGCACGATCT 001200 001201 CGGCTCAGTG CAACCTCCGC CTCCTGAGTT CAAGTGATTC TCCTGCCTCA GCCTCCCTAG TAGCTGGGAT TACAGGACAA 001280 001281 GGAGAGGGAC AAATTCCTTC TTGGCATCCT TATGGCCCTG TGACCTGCTA ATGAATGCTG ACTCTGAGTT GCTACTAGAA 001360 001361 TTTGGTTTCC TTGTGGCTTC CCAGGAATTG GTCTCACTCT GCTCACTCTG TCTCCCAAGC TGGAGTGCAG TGGTACAGTC 001440 001441 ACGGCTCACT GCAGCCTCCA CTTCCTGGAC TCAAGTGATC TTCTCACTTC AGCCTTCTGA GTAGCTGGGA CTACAGCCCC 001520 001521 CTCTGCAGCT CTTCATGGGG GTCCACTCAA GTCAGAAGCC ACATTTGGGT GTGATTCAGA GAGCTGTTTA TGCAAAACCA 001600 001601 GCTTTGTCAC CATCAGGCAA GGCACCTGAA TTCCCACCGC AGAGAGTGTT GTGGCCGTGA GGACTTTTCT GTCACCAGCC 001680 001681 ATTTCCAGGT AGACCCAGTG TAATCACAAG CATCCTTGTA AGTGGCAAAG AGGCAGAGGA GACAGCGCCA GAGAGGCAGC 001760 001761 TGCATGAGAA GGATCAAGAT GTTGCTGACT TTGAAGTTGG AAGAAGAAGG CCATGAGCCT CAGTATGTGG GCGGCTTCTA 001840 001841 GAAGCTGGAA GGGGCAAGGA GATGGATTTG ACCCTTCAGC CTCCAGGGGC AGCTGTACCT GCCATCACTG ATTGTAGCCT 001920 001921 GGTGAGGCCT GTTTTAGACT TCTGACCTGT AGAGCTGTAA CATAATACAT TTGGGTTGTT TTCAACCACT AAGTTTGTGG 002000 002001 TAATTTGTTG TAGCAGCTGT AGAAAATGAA TACATATGAA TCCTCTGGCA TTTGTTTGAG ATTTGCTCTA TGGCCTAGTA 002080 002081 TGTGGTTGTA AATGTTCCAT CTGTGCCTGA AAAAATGTAT ATTTCTAATT CAGTAGTCTC TGCTTTTTTT TTTTATTTTG 002160 002161 TACCCCATCA ATAAAATGAT TTTCAGCATG TATCCCCAAA TAAACAATAT TTTATTTATT GATTGATTGA TAAACAGACA 002240 002241 TGTTTAATGA TAGCTTGCTT TTCACAGAGG TGACTTCGGA GACTTCTAAT CTATAATCCA GGAGTATATA ACCATGCAGC 002320 002321 ACAGACCAAT TAGTCACATG TAAAATAAAC TAGATTCTTA CCAC |