NONHSAT002916
Revision as of 19:24, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002916 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
524 nt |
Genomic location |
chr1+:45480211..45481064 |
Exon number |
2 |
Exons |
45480211..45480678,45481009..45481064 |
Genome context |
|
Sequence |
000001 CCAGGTTGCG GGAGGCAGGC CTGGCACCAG TGCCCATGGT GAGGATTGGG ATGGGTTGAG TGAAGGTGGT CCTGTGGAGC 000080
000081 TTTCAGGCTA AGTCCTGCAT GGACTGGAGT GACCACTGGA GGGCAGCAGA AGTACAGTCA AGAAAGATTA GTGGTTGTAG 000160 000161 CAAGGCCCTC TGTAGCCTGA GATCTGCTTT TTTCTAGATC ATCTTTGCTA AGGATGGGCA TTTTGCCCTG GAGGAGCTGG 000240 000241 CCCAAGCTGG CTATGAGGTG GTTGGGCTTG ACTGGACAGT GGCCCCAAAG AAAGCCCGGT AAGCCATGGA AGGGTGAGGC 000320 000321 CTTGAGGTTG AGGTGGGGGT GTTGGCTGGG GGAGCTGCCA TGTATGCAGT TACCAGAACG TGGCGCTGGC TTTGCTTCCA 000400 000401 GGGAGTGTGT GGGGAAGACG GTGACATTGC AGGGCAACCT GGACCCCTGT GCCTTGTATG CATCTGAGGA GGAGATCGGG 000480 000481 CAGTTGGTGA AGCAGATGCT GGATGACTTT GGACCACATC GCTA |
Predicted Small Protein
Name | NONHSAT002916_smProtein_359:466 |
Length | 36 |
Molecular weight | 3859.4998 |
Aromaticity | 0.114285714286 |
Instability index | 50.7714285714 |
Isoelectric point | 4.55645751953 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.037524919878 |
Amino acid sequence | MYAVTRTWRWLCFQGVCGEDGDIAGQPGPLCLVCI |
Secondary structure | LEEEELLLHHHHHLLLLLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |