NONHSAT016123
Revision as of 20:18, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT016123 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1191 nt |
Genomic location |
chr10+:104209890..104216056 |
Exon number |
2 |
Exons |
104209890..104210117,104215094..104216056 |
Genome context |
|
Sequence |
000001 AGGAAGGAGG GAGGTCCAGG CCCTTCTTCC ATCCCACGTC CTCCACTTCC CAAGGTGCAA GAAGAAAAGA GGTACAGAAC 000080
000081 ACCCAGAGGT GCCCTCGATT CCGTCTTGCA CTTGCCCTTC TCCCACCGTC CAGCAATAAA GCGAGAGAAA CAAGTGCAGG 000160 000161 AAACTGGCCG GCAGTCATGG GAGAAGCCAA AAAGACAGGT GAGCAGCGCG TCCGCCTCCC GCGCACAGga gttcagtggc 000240 000241 atgaccaggg ctcactgcaa ccttgatctg ggctcaagtg atcctcctac ctcagcttcc tgagtagcta ggaccacagg 000320 000321 tgtgcaccaa ccacacccga ctaatttttg tagagatgag atcccactat gttacccagg ctggtcttga actcctgggc 000400 000401 tcaggtgatc atcctgcctt ggcttcccaa agtactggga ttataggctt gagccaccgt gcctggccTG TGATCAGAAT 000480 000481 TCTCATTTTT TTAGTCACTA Aaaatgctgg ggggcactcc attctccatt atgtgattag ttcacattgc atgcttgtat 000560 000561 caaaacatca tatatacccc acaaatatat acaAAAAACT TTAAAATTTT AAGTATTAAT TGCTCAGGAA AAAATTAAAA 000640 000641 TGCTGGGGTG CTGAAATCTC AAGGGCCCCA TTACAAAACT CCTTAGGAAC CTCGCCCTCT CTCTGCTGTA AGGACTGGTT 000720 000721 CCAGAATGAG AGAATTTAAA AGACATTCcc cccccaaaat gttcataatg tcaccccgga aacctgcgaa tatgttatat 000800 000801 tacatgacca gggagaagta aggttgcaga tggcagtaag gttgctaatg ggctgacctt aagataagga gatgatcctg 000880 000881 gattatctgg gtggacccaa tgtaatcaca agggtcctta actgtggaat agtgaggtgg ctgagtcaga ggcagagtga 000960 000961 tgcaatgact gaaagactta accagccatc accggctttg aatacggaag acggtcatga gccagggaat gcaggcaggc 001040 001041 tctgggagct gaaaaaagca agaaaatgga ttctcccctg gagcctccag aagggatgcg gtcctgccaa ccccttgtca 001120 001121 gtgagccatt tcagatttct gacttccagg actgtaagaa aataaacttg tcttgttttc agccaccaag t |
Predicted Small Protein
Name | NONHSAT016123_smProtein_725:820 |
Length | 32 |
Molecular weight | 3902.7036 |
Aromaticity | 0.129032258065 |
Instability index | 96.9516129032 |
Isoelectric point | 10.6204223633 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0472354707648 |
Amino acid sequence | MREFKRHSPPKMFIMSPRKPANMLYYMTREK |
Secondary structure | LLLLLLLLLLLLEEELLLLHHHHHHHHHLLL |
PRMN | - |
PiMo | - |