NONHSAT028247
Revision as of 21:00, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT028247 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
854 nt |
Genomic location |
chr12+:51632508..51640501 |
Exon number |
2 |
Exons |
51632508..51632704,51639845..51640501 |
Genome context |
|
Sequence |
000001 CGGACCCTCC CGCGGCCGAC TGGAGGCCCG GAGCAGGGGC GGAGTTTCCG GCGGCAGCGC CACTCGGGCG TCGGGTGACG 000080
000081 CTAGGCGGAC GGACCATCAT GTGACACGGA AGTAGCTCCG AACAGGAAGA GGACGAAAAA AATAACCGTC CGCGACGCCG 000160 000161 AGACAAACCG GACCCGCAAC CACCATGAAC AGCAAAGGTA AAAGAAGATC AAGATCACGA CCGAGAGCAG GGTGAGGAAG 000240 000241 ACAACGGTGA TAACAACTTG GAAAGGAGAG GGAAAATGTA GAGATGTTTC AGGATTGAGG ATGTCTCAGT AGTTCCTGGA 000320 000321 GTCATCTGAT TTAGTCACTG TTTTCGTAAA GATCCTCTTG TTTTCATTAA CTAGTGTCCA CTTCCATCCA AACCCATGTT 000400 000401 CCCCCACCAA CCCCAATTTC CATGGCACAT AATAGCTGGA GTCTCCTGGT GCTTAAGCTA AGGACACATG CTTTTGATTT 000480 000481 CTGACAAAAC TGAACTGCCT CCCAAACCAG TTCCTGATTC TTAAAGAAAC GGGAAGGAGG GAACAGGAAA TGGCTTATCC 000560 000561 TAACAGGAAG TGGTTTATCT GATCCTCCCC CTCTTCCTCA CCCACTCAAC CAACCACATA TATCCTCGTC CCTACCCACG 000640 000641 TACTCAAGTG TAACGTCCGT ATGCATATCT ATTTGCGGCC ACCTCCCAAC CTGTCATTTA CTGGTAGTGC CTCTGACAGA 000720 000721 AGCCTCCGAG TCTTTTATGG Ctgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtAATA TAACTTACAA GCCAGAGTGA 000800 000801 GCCCATTAAT GGATTTGGTC AGGCTCCCTC TGGAGAGAGA TGCCCTTGAT CCAG |
Predicted Small Protein
Name | NONHSAT028247_smProtein_395:460 |
Length | 22 |
Molecular weight | 2481.8918 |
Aromaticity | 0.190476190476 |
Instability index | 82.619047619 |
Isoelectric point | 6.68426513672 |
Runs | 6 |
Runs residual | 0.0394557823129 |
Runs probability | 0.0280721898368 |
Amino acid sequence | MFPHQPQFPWHIIAGVSWCLS |
Secondary structure | LLLLLLLLLHHHELLLEELLL |
PRMN | - |
PiMo | - |