NONHSAT034649

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT034649

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1024 nt

Genomic location

chr13+:91145542..91187596

Exon number

6

Exons

91145542..91145671,91150464..91150519,91165742..91165826,91179654..91179752,91185030..91185074,91187009..91187596

Genome context

Sequence
000001 ATACAATGGC TTCTGGTCAA TTCAGTCATA AGATGTATTC CTGGCTGGAA AATTCTGCTA TTTGGAATCT ACAGTTAGAC 000080
000081 AAGACTGCAT GTTAGACTCT GAAGTTAGGC AGGGTCACCA CCCTGGACAG GTATGGAATG TATTCGGTGT TGAGGAGTTT 000160
000161 GGACAGTACA GCAGCAGCTG CTCTAGAGCA TAAGCAGATG GTGAATGTTC AACTTGATTA CATTGACCAA ACGGAATTGG 000240
000241 ATAACAAACT CGAAATAGTT TGAGAAAAAA GCACACGTAT AATGCCTAGA GATGTAAAAG CCATTTTGCA AGAATGAGAA 000320
000321 TGAGTGCTAC ATGCTAAGGA AAGTGGAATG GAAAGTTAAG AACAGTTAAG AATGAGGTGA AGACTTGAAA AGGGAAAATT 000400
000401 GTCTTTGTTG AAGAGCGCTT GTCTCCTGAC AGTTACTCAG TGATGCAAAG CTAAAAAGAG CACTGTGCTC ATGGTGGAAA 000480
000481 ATAATTCCCA GGACTTGACA GGGAAGAATG TACTCATTCC ACGCCCCGGG CAGAAGTCTG CTGAGACAAA CAGAAGAAAG 000560
000561 ATAGTTAGTG AGCAAATTCA TCAAGACCAA TATCATGTAT TTCTCCCCCT GGCCTGATGG CTGATTTGCA CTCCTCCTGT 000640
000641 AAGCAACAAA ACTGCAAAAC CAGTGCTACA AAACAGAAGC ACCTGTAAGT CCGTGGGAGC ACATCTTTGC TCAACAAGAG 000720
000721 ATCCTGACAA CTAACAACTA ACAACCATCT GCCTGAGACA CAGTTCGAGT TTTTAAGATG CATCAGTTCC CCTTTCCAGC 000800
000801 CTGAAGCCTC ATCATCAAAC AATGCTTCCA ATGCTTGGCA TGTTTAATTA TAGAATTATA AACTATTAGA GCTTGCTTCC 000880
000881 TTGGCAATTA TGTGAGGCAA CCCTCAAACT TTCCAGAGGA TAATGAGCGT AGGCTAATTT GATGGTATTT CAAGGTCATG 000960
000961 CATCTATTTG AAAAAGAGAT CAGAATAAAA TCCAGATTTC AAAAAAAAAA AAAAAAAAAA AAAA
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Predicted Small Protein

Name NONHSAT034649_smProtein_470:616
Length 49
Molecular weight 5501.155
Aromaticity 0.0416666666667
Instability index 41.00625
Isoelectric point 8.23040771484
Runs 9
Runs residual 0.0219298245614
Runs probability 0.0488429606077
Amino acid sequence MVENNSQDLTGKNVLIPRPGQKSAETNRRKIVSEQIHQDQYHVFLPLA
Secondary structure LLLLLLLLLLLLEEEELLLLLLLHHHLLHHHHHHHHLLLEEEEELLLL
PRMN -
PiMo -