NONHSAT070414

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT070414

Source

NONCODE4.0

Same with

,

Classification

sense

Length

560 nt

Genomic location

chr2-:44570944..44588952

Exon number

3

Exons

44570944..44571090,44573407..44573529,44588663..44588952

Genome context

Sequence
000001 ATTGCACCAT TCTTGCTGGT AGCCATCTTG AGTGAGGGCG GACCAGAGGA TGAGAGAGCT GTGGCAGGGC TACTGGAACG 000080
000081 CTGTCCCTCA TTGTTTTAGC CTTCTGTGCT TCATCTCGAG CTCAGAAGAC TAGCGAAGAA CGAAAAGTCT TATATATTTC 000160
000161 GAGACTAAAG AACCCAGGAA CCCAAGAAGA CTCCTTGACC ACAACAAAGA TGGCGAAATC TGCCTGTTGC TCGTGCTAGA 000240
000241 TTGAGGTTAC GTAGATTGGC GTGCTGCAAA CCAGCTCTAG GCGGCTCTGG GATCTTCAGC CTGTTAAACA AGAAAACGAA 000320
000321 AAACCCCTTC CAGAAAACAT GGATGCATTT GAAAAAGTGA GAACAAAATT AGAAACACAG CCACAAGAAG AATATGAAAT 000400
000401 CATCAATGTG GAACAGACAA TGATAATTAT GAAGTTTTAT TCAATTTGGA GGAACTTAAG TTAGACCAGC CCTTCATTGA 000480
000481 TTGTATCAGA GTTGCTCCAG ATGAAAAATA TGTGGCTGCC AAGATAAGAA CTGAAGATTC TGAAGCATCT ACCTGTGTAA 000560
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Predicted Small Protein

Name NONHSAT070414_smProtein_338:463
Length 42
Molecular weight 5053.7843
Aromaticity 0.121951219512
Instability index 44.3368292683
Isoelectric point 4.81512451172
Runs 7
Runs residual 0.00523716893611
Runs probability 0.0302066772656
Amino acid sequence MDAFEKVRTKLETQPQEEYEIINVEQTMIIMKFYSIWRNLS
Secondary structure LLHHHHHHHHLLLLLHHHHEEEHHHHHHHHHHHHHHHHLLL
PRMN -
PiMo -