NONHSAT083181

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT083181

Source

NONCODE4.0

Same with

,

Classification

sense

Length

621 nt

Genomic location

chr22+:17565947..17578399

Exon number

2

Exons

17565947..17566119,17577952..17578399

Genome context

Sequence
000001 GCCGGGGCCG AGCCCTCCGC GACGCCAGCC GGGCCATGGG GGCCGCACGC AGCCCGCCGT CCGCTGTCCC GGGGCCCCTG 000080
000081 CTGGGGCTGC TCCTGCTGCT CCTGGGCGTG CTGGCCCCGG GTGGCGCCTC CCTGCGACTC CTGGACCACC GGGCGCTGGT 000160
000161 CTGCTCCCAG CCGGGGCTAA ACTGCACGGT CAAGAATAGT AAGTCATCTT TTTCTGTTCT TCTTCTTGTT GCCTTCTTAA 000240
000241 TCAAGTGAGA GCCTGCTGCC AACTTCTGAC AGAAGTCTTG CCATGCCACT CCAGGTTCAG GCTGTGAGCT ACAGCCATCC 000320
000321 GCAGGAGGGT TCCCGGAGAA TTGTGGATGC GTGCACCTGC GCTTCCTGTC GAGAACATTC ATTATGCAAA AGTCAGGAAA 000400
000401 GGAGAAACAG AACTGTCATT TGGATTGTGA AAGTATTCTC TGGGGAGCTG CCCTACTGTA TCTATAATAT AATTTGATTT 000480
000481 GCCACAGCTT GTCACTGTAA AGTGAGAGAC ATCTGTGCTG TTGATTTTGT TTTGTTTTAA TTCAAAGAGG CACATATTCA 000560
000561 AGTGTCTGAG CCAATTAGAG ACCCCTGACA TATAACAATA AAGCAGCTCT TACTACAACT G
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Predicted Small Protein

Name NONHSAT083181_smProtein_35:247
Length 71
Molecular weight 7133.5781
Aromaticity 0.0285714285714
Instability index 46.3814285714
Isoelectric point 10.3208618164
Runs 11
Runs residual 0.0123055162659
Runs probability 0.058855647091
Amino acid sequence MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSKSSFS
VLLLVAFLIK
Secondary structure LLLLLLLLLLLLLHHHHHHHHHHHHHLLLLLLHHHHHLLEEEELLLLLLEEEELLLLLHH
HHHHHHHHHL
PRMN LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLHHHHHHHH
HHHHHHHHHH
PiMo ooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiTTTTTTTT
TTTTTTTTTT