NONHSAT090358
Revision as of 00:35, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090358 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
571 nt |
Genomic location |
chr3-:69355558..69370133 |
Exon number |
4 |
Exons |
69355558..69355873,69360414..69360508,69362603..69362668,69370040..69370133 |
Genome context |
|
Sequence |
000001 AGATGGACAA AGTCTTTCCA CCAGTAATCA GCACTTGCAC TCTGAGGACT GACTCTTACC AGCTGGGGAG CAAACAGGCC 000080
000081 AGCTGGAGAC CGAGATGACA GAAGGCAGGC ACTGCCAGGT GCACCTCCTG GATGATAGGA GACTGGAGCT GCTGGTTCAG 000160 000161 CCCAAACTTC TAGCAAGAGA GTTGCTGGAC CTAGTGGCTT CACATTTCAA CCTGAAAGAA AAGGAGTATT TTGGAATAAC 000240 000241 ATTCATAGAT GACACGCCAA GAGGAGAAAC GGAAAAATAG ATGGCAATTA CGCAATAAAA GCAGTGATGA TGACCAACAA 000320 000321 CCACAGATTC AAGGTCACGT TACTGGGAGA GGGATAGCAT TTCTGAGATT ACGCTTGTTA GGGCCTTGCG CAGCTCTGTG 000400 000401 TGCAAAGTTA GTCTTTCACC CCTAGAGGGC AGTCACGGCC CTCCTGAGGC ACCAGTCCTT CAGGTCACCG TAGTGGTTCC 000480 000481 ATCTCTTCAC CCATTTCACT TTTTGTTTTG CCTTCTCATG TTTTGAAAGG CTTTGCTAAA TAAGCTTTGT TTACCAAGAA 000560 000561 ATAACAGATA G |
Predicted Small Protein
Name | NONHSAT090358_smProtein_248:424 |
Length | 59 |
Molecular weight | 6713.6981 |
Aromaticity | 0.051724137931 |
Instability index | 57.4293103448 |
Isoelectric point | 10.4183959961 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0291762350586 |
Amino acid sequence | MTRQEEKRKNRWQLRNKSSDDDQQPQIQGHVTGRGIAFLRLRLLGPCAALCAKLVFHP |
Secondary structure | LLHHHHHHHHHHHHHLLLLLLLLLLLLEEEELLHHHHHHHHHHLLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |