NONHSAT102052
Revision as of 01:21, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102052 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
429 nt |
Genomic location |
chr5-:71591376..71616065 |
Exon number |
4 |
Exons |
71591376..71591416,71593459..71593529,71609908..71609985,71615827..71616065 |
Genome context |
|
Sequence |
000001 TTTTGGTACG CTCCAAGATG GCTGCCTCCA TAGTGCGGCG CGGGATGCTC CTGGCGCGGC AAGTGGTTCT TCCTCAGCTC 000080
000081 TCTCCTGCAG GTTGGCCGGA CAGCTTCATT AGGCCCCTGA TTATTCTGTT TTTTGGGTGA AGGGAGCGGT GGGCTTTCAA 000160 000161 GAGGAGAGGA AACGTTTCTG GAATCTGATT GCTAGGGACG CCATTTGGGG TGTTTGGTAG TGCAGAAGAA GGAGACAAGG 000240 000241 TAAAAGATAC CTGCTTTCTT CAGCCTATGT AGACAGCCAC AAATGGGAAG CAAGAGAAAA AGAACATTAC TGTCTTGCTG 000320 000321 ATCTTGCATC TTTAATGGAT AAAACATTTG AGAGAAAGTT GCCTGTTAGT TCTTTAACAA TATCACGGCT TATAGACAAC 000400 000401 ATTTCCTCTC GGGAAGAGAT AGATCATGC |
Predicted Small Protein
Name | NONHSAT102052_smProtein_17:139 |
Length | 41 |
Molecular weight | 4438.3544 |
Aromaticity | 0.1 |
Instability index | 66.915 |
Isoelectric point | 12.0000610352 |
Runs | 6 |
Runs residual | 0.0280241935484 |
Runs probability | 0.00789024318437 |
Amino acid sequence | MAASIVRRGMLLARQVVLPQLSPAGWPDSFIRPLIILFFG |
Secondary structure | LHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLHHHEEELL |
PRMN | - |
PiMo | - |